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contig_metadata

29 rows where bioproject = "PRJNA1240804", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 29 ✖

tax_clade 1

  • Sar · 29 ✖

bioproject 1

  • PRJNA1240804 · 29 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
347545 347545 PRJNA1240804_P_NODE_16421_length_336_cov_4.522648_g16056_i0 PRJNA1240804 16421 336 4.522648 15.19609728 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 309 1.7e-79   NTclustered gi|756877536|ref|NC_026310.1| 372086 g16056 i0 89.669 0.720238095238095 242 25 72 0 95 336 278 37 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 242 309 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
1622512 1622512 PRJNA1240804_P_NODE_27142_length_276_cov_7.105727_g26776_i0 PRJNA1240804 27142 276 7.105727 19.61180652 Cercomonas sp. C59 372078 SAR_Eukaryotes SAR_Eukaryotes 303 6.35e-78   NTclustered gi|88792584|gb|DQ386165.1| 372078 g26776 i0 87.687 94.2826086956522 268 23 95 6 14 276 2520 2782 Cercomonas sp. C59 28S ribosomal RNA gene, partial sequence blastn 26022 303 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. C59
1622773 1622773 PRJNA1240804_P_NODE_38022_length_242_cov_2.466321_g37656_i0 PRJNA1240804 38022 242 2.466321 5.96849682 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 448 2.3799999999999995e-121   NTclustered gi|238617602|gb|FJ973377.1| 188950 g37656 i0 100 29.6115702479339 242 0 100 0 1 242 2158 2399 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 7166 448 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
2899131 2899131 PRJNA1240804_P_NODE_42923_length_231_cov_2.208791_g42557_i0 PRJNA1240804 42923 231 2.208791 5.10230721 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 318 1.84e-82   NTclustered gi|756877536|ref|NC_026310.1| 372086 g42557 i0 95.5 3.9004329004329 200 7 86 2 12 210 1241 1439 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 901 318 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
2899999 2899999 PRJNA1240804_P_NODE_8683_length_432_cov_56.704961_g8321_i0 PRJNA1240804 8683 432 56.704961 244.96543152 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 405 2.78e-108   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g8321 i0 86.807 50.2962962962963 379 30 87 11 14 388 3656 4018 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 21728 405 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
3600846 3600846 PRJNA1240804_P_NODE_5483_length_519_cov_30.976596_g5126_i0 PRJNA1240804 5483 519 30.976596 160.76853324 Paracercomonas 372085 SAR_Eukaryotes SAR_Eukaryotes 898 0   NTclustered gi|406609869|dbj|AB749144.1| 175275 g5126 i0 99.594 90.990366088632 493 0 95 1 15 505 1177 1669 Uncultured cercozoan gene for 18S ribosomal RNA, partial sequence, clone: Cn-St.10-95 blastn 47224 898 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
4878245 4878245 PRJNA1240804_P_NODE_3224_length_637_cov_11.831633_g2889_i0 PRJNA1240804 3224 637 11.831633 75.36750221 Imbricatea 1736114 SAR_Eukaryotes SAR_Eukaryotes 416 1.95e-111   NTclustered gi|238617606|gb|FJ973381.1| 39717 g2889 i0 79.206 63.0879120879121 630 108 97 21 1 621 1898 1283 Paulinella chromatophora strain FK01 28S ribosomal RNA gene, partial sequence blastn 40187 416 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
5451827 5451827 PRJNA1240804_P_NODE_4565_length_558_cov_2.495088_g4215_i0 PRJNA1240804 4565 558 2.495088 13.92259104 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 562 2.05e-155   NTclustered gi|238617605|gb|FJ973380.1| 45107 g4215 i0 85.027 100.240143369176 561 74 99 9 3 558 1006 1561 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 55934 562 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
6153096 6153096 PRJNA1240804_P_NODE_73425_length_191_cov_1.330986_g73059_i0 PRJNA1240804 73425 191 1.330986 2.54218326 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 316 5.28e-82   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g73059 i0 99.429 6.38743455497382 175 0 91 1 4 177 356 182 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 1220 316 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
6726702 6726702 PRJNA1240804_P_NODE_74066_length_190_cov_10.177305_g73700_i0 PRJNA1240804 74066 190 10.177305 19.3368795 uncultured Cercomonas 1395131 SAR_Eukaryotes SAR_Eukaryotes 344 2.3999999999999993e-90   NTclustered gi|937077552|gb|KR131437.1| 1395131 g73700 i0 100 97.8368421052632 186 0 98 0 3 188 1026 1211 Uncultured Cercomonas clone 489 18S ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 18589 344 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae   uncultured Cercomonas
9276288 9276288 PRJNA1240804_P_NODE_34208_length_252_cov_3.615764_g33842_i0 PRJNA1240804 34208 252 3.615764 9.11172528 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 143 1.32e-29   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g33842 i0 97.59 26.5277777777778 83 2 33 0 156 238 3849 3767 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 6685 143 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
9277383 9277383 PRJNA1240804_P_NODE_87168_length_181_cov_11.507576_g86802_i0 PRJNA1240804 87168 181 11.507576 20.82871256 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 196 6.709999999999999e-46   NTclustered gi|88792583|gb|DQ386164.1| 372086 g86802 i0 88.024 19.8508287292818 167 19 92 1 15 180 2045 2211 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 3593 196 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
11253160 11253160 PRJNA1240804_P_NODE_10849_length_395_cov_50.199422_g10485_i0 PRJNA1240804 10849 395 50.199422 198.2877169 Cercomonadidae 45108 SAR_Eukaryotes SAR_Eukaryotes 699 0   NTclustered gi|33330170|gb|AF534712.1| 212382 g10485 i0 99.738 93.1645569620253 382 0 96 1 1 381 387 6 Cercomonas sp. SmallSA 18S ribosomal RNA gene, partial sequence blastn 36800 699 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. SmallSA
11825775 11825775 PRJNA1240804_P_NODE_118450_length_167_cov_1.169492_g118084_i0 PRJNA1240804 118450 167 1.169492 1.95305164 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 145 2.25e-30   NTclustered gi|238617607|gb|FJ973382.1| 39717 g118084 i0 90.179 71.2095808383233 112 9 67 1 42 153 1090 981 Paulinella chromatophora strain MO88/a 28S ribosomal RNA gene, partial sequence blastn 11892 145 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
11826266 11826266 PRJNA1240804_P_NODE_14710_length_351_cov_5.423841_g14345_i0 PRJNA1240804 14710 351 5.423841 19.03768191 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 305 2.31e-78   NTclustered gi|756877536|ref|NC_026310.1| 372086 g14345 i0 88.889 0.717948717948718 252 22 71 5 103 351 909 1157 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 252 305 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
13100527 13100527 PRJNA1240804_P_NODE_100031_length_173_cov_1.612903_g99665_i0 PRJNA1240804 100031 173 1.612903 2.79032219 uncultured Allapsa 1938458 SAR_Eukaryotes SAR_Eukaryotes 113 6.5700000000000005e-21   NTclustered gi|1915674190|emb|LR867809.1| 1938458 g99665 i0 82.609 23.7514450867052 138 15 75 5 45 173 43 180 uncultured Allapsa partial 18S rRNA gene blastn 4109 113 1 Eukaryota Sar   Cercozoa   Glissomonadida     uncultured Allapsa
14377391 14377391 PRJNA1240804_P_NODE_46592_length_224_cov_4.440000_g46226_i0 PRJNA1240804 46592 224 4.44 9.9456 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 265 2.35e-66   NTclustered gi|756877536|ref|NC_026310.1| 372086 g46226 i0 89.573 0.941964285714286 211 19 94 3 15 224 525 733 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 211 265 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
15650583 15650583 PRJNA1240804_P_NODE_151913_length_161_cov_2.053571_g151547_i0 PRJNA1240804 151913 161 2.053571 3.30624931 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 226 7.449999999999999e-55   NTclustered gi|756877536|ref|NC_026310.1| 372086 g151547 i0 95.105 0.88819875776397506 143 7 89 0 15 157 18151 18293 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 143 226 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
15651257 15651257 PRJNA1240804_P_NODE_42873_length_231_cov_2.923077_g42507_i0 PRJNA1240804 42873 231 2.923077 6.75230787 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 396 8.279999999999997e-106   NTclustered gi|238617602|gb|FJ973377.1| 188950 g42507 i0 100 92.9177489177489 214 0 93 0 15 228 823 1036 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 21464 396 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
15651773 15651773 PRJNA1240804_P_NODE_68073_length_195_cov_2.554795_g67707_i0 PRJNA1240804 68073 195 2.554795 4.98185025 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 296 7.05e-76   NTclustered gi|238617605|gb|FJ973380.1| 45107 g67707 i0 96.648 90.4205128205128 179 5 91 1 1 178 1420 1242 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 17632 296 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
16924962 16924962 PRJNA1240804_P_NODE_19654_length_314_cov_1.283019_g19288_i0 PRJNA1240804 19654 314 1.283019 4.02867966 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 250 9.71e-62   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g19288 i0 82.06 34.9267515923567 301 46 96 7 15 314 2197 2490 Rosculus vulgaris isolate CCA sequence blastn 10967 250 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
16925236 16925236 PRJNA1240804_P_NODE_31014_length_262_cov_6.206573_g30648_i0 PRJNA1240804 31014 262 6.206573 16.26122126 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 459 1.21e-124   NTclustered gi|238617602|gb|FJ973377.1| 188950 g30648 i0 100 0.946564885496183 248 0 95 0 15 262 408 655 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 248 459 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
16926388 16926388 PRJNA1240804_P_NODE_87174_length_181_cov_6.583333_g86808_i0 PRJNA1240804 87174 181 6.583333 11.91583273 Mesofila limnetica 1979842 SAR_Eukaryotes SAR_Eukaryotes 148 1.9099999999999998e-31   NTclustered gi|88792585|gb|DQ386166.1| 1979842 g86808 i0 96.667 48.6243093922652 90 2 50 1 33 122 1598 1686 Dimorpha-like sp. ATCC 50522 28S ribosomal RNA gene, partial sequence blastn 8801 148 1 Eukaryota Sar   Cercozoa     Mesofilidae Mesofila Mesofila limnetica
19474318 19474318 PRJNA1240804_P_NODE_39696_length_238_cov_2.280423_g39330_i0 PRJNA1240804 39696 238 2.280423 5.42740674 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 344 3.15e-90   NTclustered gi|756877536|ref|NC_026310.1| 372086 g39330 i0 93.22 0.991596638655462 236 13 99 3 4 238 17849 18082 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 236 344 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
20749665 20749665 PRJNA1240804_P_NODE_36837_length_245_cov_1.811224_g36471_i0 PRJNA1240804 36837 245 1.811224 4.4374988 Rosculus elongata 1808988 SAR_Eukaryotes SAR_Eukaryotes 427 3.14e-115   NTclustered gi|1002343691|gb|KU738569.1| 1808988 g36471 i0 100 16.530612244898 231 0 94 0 1 231 378 148 Rosculus elongata isolate S14D1 18S ribosomal RNA gene, partial sequence blastn 4050 427 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus elongata
22025079 22025079 PRJNA1240804_P_NODE_45558_length_226_cov_1.994350_g45192_i0 PRJNA1240804 45558 226 1.99435 4.507231 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 252 1.85e-62   NTclustered gi|756877536|ref|NC_026310.1| 372086 g45192 i0 88.732 0.942477876106195 213 15 92 8 14 220 18963 19172 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 213 252 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
23299175 23299175 PRJNA1240804_P_NODE_103639_length_171_cov_1.286885_g103273_i0 PRJNA1240804 103639 171 1.286885 2.20057335 Homocognata cf. vulgaris 2231174 SAR_Eukaryotes SAR_Eukaryotes 63.9 6.62e-6   NTclustered gi|1402550492|gb|MH488778.1| 2231174 g103273 i0 97.297 20.4619883040936 37 1 22 0 3 39 2802 2766 Homocognata cf. vulgaris isolate CGS2A sequence blastn 3499 63.9 1 Eukaryota Sar   Cercozoa       Homocognata Homocognata cf. vulgaris
23300632 23300632 PRJNA1240804_P_NODE_39619_length_238_cov_13.201058_g39253_i0 PRJNA1240804 39619 238 13.201058 31.41851804 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 86.1 2.11e-12   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g39253 i0 89.552 0.436974789915966 67 7 28 0 13 79 4018 3952 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 104 86.1 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
23300867 23300867 PRJNA1240804_P_NODE_50199_length_218_cov_3.934911_g49833_i0 PRJNA1240804 50199 218 3.934911 8.57810598 Partenskyella glossopodia 552666 SAR_Eukaryotes SAR_Eukaryotes 243 1.0700000000000001e-59   NTclustered gi|220983375|dbj|AB453011.1| 552666 g49833 i0 87.442 98.8440366972477 215 22 99 3 1 215 1224 1433 Partenskyella glossopodia gene for nuclear large subunit ribosomal RNA, partial sequence blastn 21548 243 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Partenskyella Partenskyella glossopodia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;