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contig_metadata

31 rows where bioproject = "PRJNA1240804", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 31 ✖

tax_clade 1

  • Sar · 31 ✖

bioproject 1

  • PRJNA1240804 · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1622335 1622335 PRJNA1240804_P_NODE_19702_length_313_cov_4.946970_g19336_i0 PRJNA1240804 19702 313 4.94697 15.4840161 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 544 3.96e-150   NTclustered gi|2059418577|gb|MW971520.1| 303405 g19336 i0 98.083 112.635782747604 313 4 99 1 1 311 15636 15948 Nitzschia inconspicua strain hildebrandi plastid, complete genome blastn 35255 544 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
2325655 2325655 PRJNA1240804_P_NODE_65242_length_198_cov_6.187919_g64876_i0 PRJNA1240804 65242 198 6.187919 12.25207962 Bacillariaceae 33852 SAR_Eukaryotes SAR_Eukaryotes 361 2.51e-95   NTclustered gi|2127877266|ref|NC_058784.1| 183589 g64876 i0 99.495 195.969696969697 198 1 100 0 1 198 46854 47051 Pseudo-nitzschia multistriata isolate CNS00142 chloroplast, complete genome blastn 38802 361 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Pseudo-nitzschia Pseudo-nitzschia multistriata
2900015 2900015 PRJNA1240804_P_NODE_87843_length_181_cov_1.469697_g87477_i0 PRJNA1240804 87843 181 1.469697 2.66015157 Naviculales sp. 2126271 SAR_Eukaryotes SAR_Eukaryotes 239 1.0999999999999999e-58   NTclustered gi|2620230846|gb|OR797295.1| 2126271 g87477 i0 92.262 46.5580110497238 168 13 93 0 14 181 4708 4875 Naviculales sp. strain SZCZO2114 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8427 239 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales     Naviculales sp.
3600764 3600764 PRJNA1240804_P_NODE_3783_length_597_cov_9.408759_g3442_i0 PRJNA1240804 3783 597 9.408759 56.17029123 Nitzschia 2857 SAR_Eukaryotes SAR_Eukaryotes 795 0   NTclustered gi|659666218|emb|HF679160.1| 303405 g3442 i0 93.519 92.2579564489112 540 25 89 7 1 534 746 211 Nitzschia inconspicua partial 28S rRNA gene, strain G3_2 blastn 55078 795 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
3600804 3600804 PRJNA1240804_P_NODE_46623_length_224_cov_3.131429_g46257_i0 PRJNA1240804 46623 224 3.131429 7.01440096 Hantzschia 186033 SAR_Eukaryotes SAR_Eukaryotes 374 3.7399999999999986e-99   NTclustered gi|18698476|gb|AF417677.1| 186034 g46257 i0 99.038 92.09375 208 2 93 0 15 222 76 283 Hantzschia amphioxys strain UTEX657 large subunit ribosomal RNA gene, partial sequence blastn 20629 374 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Hantzschia Hantzschia amphioxys
5451454 5451454 PRJNA1240804_P_NODE_29065_length_269_cov_2.213636_g28699_i0 PRJNA1240804 29065 269 2.213636 5.95468084 Halamphora calidilacuna 2133758 SAR_Eukaryotes SAR_Eukaryotes 440 4.4999999999999997e-119   NTclustered gi|1549146930|gb|MH810165.1| 2133758 g28699 i0 98.024 48.3754646840149 253 5 94 0 17 269 5605 5857 Halamphora calidilacuna voucher JPK8506-AMPH118 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 13013 440 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Amphipleuraceae Halamphora Halamphora calidilacuna
6724948 6724948 PRJNA1240804_P_NODE_123226_length_166_cov_1.735043_g122860_i0 PRJNA1240804 123226 166 1.735043 2.88017138 Chaetoceros pseudocurvisetus 426637 SAR_Eukaryotes SAR_Eukaryotes 220 3.6e-53   NTclustered gi|2043890829|gb|MZ267684.1| 426637 g122860 i0 92.81 6.66867469879518 153 10 92 1 2 153 2078 1926 Chaetoceros pseudocurvisetus isolate CNS00390 large subunit ribosomal RNA gene, partial sequence blastn 1107 220 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros pseudocurvisetus
8002541 8002541 PRJNA1240804_P_NODE_89947_length_180_cov_1.114504_g89581_i0 PRJNA1240804 89947 180 1.114504 2.0061072 Hemiaulus sinensis 1003062 SAR_Eukaryotes SAR_Eukaryotes 171 4.0399999999999996e-38   NTclustered gi|2328368811|ref|NC_067954.1| 1003062 g89581 i0 87.333 159.927777777778 150 18 83 1 1 150 17422 17274 Hemiaulus sinensis chloroplast, complete genome blastn 28787 171 1 Eukaryota Sar   Bacillariophyta Mediophyceae Hemiaulales Hemiaulaceae Hemiaulus Hemiaulus sinensis
12528498 12528498 PRJNA1240804_P_NODE_109190_length_169_cov_0.866667_g108824_i0 PRJNA1240804 109190 169 0.866667 1.46466723 Bacillariaceae sp. 3061772 SAR_Eukaryotes SAR_Eukaryotes 94.7 5.13e-21   NR KAL3924210.1 3061772 g108824 i0 95.7 4.08284023668639 46 2 81.7 0 7 144 284 329 KAL3924210.1 MAG: hypothetical protein SGILL_001187 [Bacillariaceae sp.] diamond 690 94.7 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae   Bacillariaceae sp.
12528766 12528766 PRJNA1240804_P_NODE_29590_length_267_cov_2.784404_g29224_i0 PRJNA1240804 29590 267 2.784404 7.43435868 Bacillariaceae 33852 SAR_Eukaryotes SAR_Eukaryotes 477 3.3999999999999993e-130   NTclustered gi|2127877266|ref|NC_058784.1| 183589 g29224 i0 98.881 200.749063670412 268 2 100 1 1 267 48090 48357 Pseudo-nitzschia multistriata isolate CNS00142 chloroplast, complete genome blastn 53600 477 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Pseudo-nitzschia Pseudo-nitzschia multistriata
13101372 13101372 PRJNA1240804_P_NODE_149391_length_162_cov_0.920354_g149025_i0 PRJNA1240804 149391 162 0.920354 1.49097348 Chaetoceros costatus 426630 SAR_Eukaryotes SAR_Eukaryotes 274 2.64e-69   NTclustered gi|2043890828|gb|MZ267683.1| 426630 g149025 i0 100 92.1481481481482 148 0 91 0 15 162 1284 1431 Chaetoceros costatus isolate CNS00386 internal transcribed spacer 2 and large subunit ribosomal RNA gene, partial sequence blastn 14928 274 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros costatus
13803555 13803555 PRJNA1240804_P_NODE_31591_length_260_cov_6.028436_g31225_i0 PRJNA1240804 31591 260 6.028436 15.6739336 Bacillariaceae 33852 SAR_Eukaryotes SAR_Eukaryotes 457 4.3e-124   NTclustered gi|2202538965|gb|OM891871.1| 515483 g31225 i0 98.828 97.1769230769231 256 3 98 0 5 260 3648 3393 Psammodictyon constrictum small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25266 457 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Psammodictyon Psammodictyon constrictum
16352895 16352895 PRJNA1240804_P_NODE_93293_length_177_cov_6.539062_g92927_i0 PRJNA1240804 93293 177 6.539062 11.57413974 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 237 3.85e-58   NTclustered gi|1803023461|gb|MN937452.1| 2850 g92927 i0 100 195.446327683616 128 0 100 0 50 177 68207 68334 Phaeodactylum tricornutum strain ICE-H chloroplast, complete genome blastn 34594 237 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
17627816 17627816 PRJNA1240804_P_NODE_152354_length_159_cov_2.390909_g151988_i0 PRJNA1240804 152354 159 2.390909 3.80154531 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 261 2.01e-65   NTclustered gi|2497507841|gb|OQ694381.1| 210441 g151988 i0 96.25 195.85534591195 160 5 100 1 1 159 69098 69257 Asterionella formosa chloroplast, complete genome blastn 31141 261 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Asterionella Asterionella formosa
18199420 18199420 PRJNA1240804_P_NODE_19915_length_312_cov_2.026616_g19549_i0 PRJNA1240804 19915 312 2.026616 6.32304192 uncultured diatom 137771 SAR_Eukaryotes SAR_Eukaryotes 119 2.84e-22   NTclustered gi|1270189524|gb|MG266109.1| 137771 g19549 i0 92.771 21.8974358974359 83 4 26 2 219 299 381 299 Uncultured diatom clone MossITSLSU712 internal transcribed spacer 2, and 28S ribosomal RNA gene, region blastn 6832 119 1 Eukaryota Sar   Bacillariophyta         uncultured diatom
18200734 18200734 PRJNA1240804_P_NODE_80755_length_186_cov_1.306569_g80389_i0 PRJNA1240804 80755 186 1.306569 2.43021834 Bacillariophyceae sp. 1 SEH-2013 1366425 SAR_Eukaryotes SAR_Eukaryotes 124 3.32e-24   NTclustered gi|525533435|gb|KC969890.1| 1366425 g80389 i0 89 49.7150537634409 100 11 54 0 4 103 265 166 Bacillariophyceae sp. 1 SEH-2013 voucher GWS024438 28S ribosomal RNA gene, partial sequence blastn 9247 124 1 Eukaryota Sar   Bacillariophyta         Bacillariophyceae sp. 1 SEH-2013
18201134 18201134 PRJNA1240804_P_NODE_99715_length_173_cov_2.250000_g99349_i0 PRJNA1240804 99715 173 2.25 3.8925 Chaetoceros olympicus 2809014 SAR_Eukaryotes SAR_Eukaryotes 58.4 3.12e-4   NTclustered gi|2862228902|gb|PQ645536.1| 2809014 g99349 i0 100 0.179190751445087 31 0 18 0 58 88 3702 3672 Chaetoceros olympicus isolate AGSB0412 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 31 58.4 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros olympicus
19472845 19472845 PRJNA1240804_P_NODE_103156_length_171_cov_1.614754_g102790_i0 PRJNA1240804 103156 171 1.614754 2.76122934 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 239 1.02e-58   NTclustered gi|146762526|gb|EF553458.1| 2850 g102790 i0 94.268 88.9473684210526 157 8 92 1 1 157 4282 4127 Phaeodactylum tricornutum strain CCAP 1055/1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15210 239 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
19475047 19475047 PRJNA1240804_P_NODE_75016_length_190_cov_1.262411_g74650_i0 PRJNA1240804 75016 190 1.262411 2.3985809 Guinardia striata 1514137 SAR_Eukaryotes SAR_Eukaryotes 313 6.78e-81   NTclustered gi|1418587414|ref|NC_037998.1| 1514137 g74650 i0 98.857 121.631578947368 175 2 92 0 2 176 62297 62471 Guinardia striata chloroplast, complete genome blastn 23110 313 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Rhizosoleniales Rhizosoleniaceae Guinardia Guinardia striata
21452270 21452270 PRJNA1240804_P_NODE_9017_length_426_cov_4.564987_g8655_i0 PRJNA1240804 9017 426 4.564987 19.44684462 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 82.4 5.24e-11   NTclustered gi|1819718724|gb|MN956530.1| 2850 g8655 i0 78.689 7.17840375586854 122 26 29 0 139 260 1485 1606 Phaeodactylum tricornutum strain ICE-H mitochondrion, complete genome blastn 3058 82.4 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
22727284 22727284 PRJNA1240804_P_NODE_76958_length_188_cov_2.920863_g76592_i0 PRJNA1240804 76958 188 2.920863 5.49122244 Pseudo-nitzschia 41953 SAR_Eukaryotes SAR_Eukaryotes 235 1.49e-57   NTclustered gi|2839792213|gb|PQ512811.1| 37318 g76592 i0 91.765 55.4095744680851 170 13 90 1 15 184 5496 5664 Pseudo-nitzschia pungens isolate CNS00141 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10417 235 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Pseudo-nitzschia Pseudo-nitzschia pungens
23299728 23299728 PRJNA1240804_P_NODE_133799_length_165_cov_0.896552_g133433_i0 PRJNA1240804 133799 165 0.896552 1.4793108 Chaetoceros olympicus 2809014 SAR_Eukaryotes SAR_Eukaryotes 235 1.28e-57   NTclustered gi|2862228902|gb|PQ645536.1| 2809014 g133433 i0 94.702 79.5151515151515 151 8 92 0 1 151 3527 3377 Chaetoceros olympicus isolate AGSB0412 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13120 235 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros olympicus
23301060 23301060 PRJNA1240804_P_NODE_60919_length_204_cov_0.929032_g60553_i0 PRJNA1240804 60919 204 0.929032 1.89522528 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 311 2.66e-80   NTclustered gi|2059418577|gb|MW971520.1| 303405 g60553 i0 96.774 165.813725490196 186 6 91 0 5 190 19399 19214 Nitzschia inconspicua strain hildebrandi plastid, complete genome blastn 33826 311 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
24573351 24573351 PRJNA1240804_P_NODE_120780_length_167_cov_0.881356_g120414_i0 PRJNA1240804 120780 167 0.881356 1.47186452 Asterionella formosa 210441 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|1111668563|ref|NC_032029.1| 210441 g120414 i0 94.444 0.215568862275449 36 2 22 0 122 157 11024 11059 Asterionella formosa strain BGM1 mitochondrion, complete genome blastn 36 56.5 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Asterionella Asterionella formosa
24573486 24573486 PRJNA1240804_P_NODE_128880_length_165_cov_1.818966_g128514_i0 PRJNA1240804 128880 165 1.818966 3.0012939 Halamphora montana 97221 SAR_Eukaryotes SAR_Eukaryotes 279 5.81e-71   NTclustered gi|1143637947|gb|KX120341.1| 1951535 g128514 i0 100 85.6909090909091 151 0 92 0 13 163 285 435 Halamphora montana isolate L1327 28S ribosomal RNA gene, partial sequence blastn 14139 279 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Amphipleuraceae Halamphora Halamphora montana
24575235 24575235 PRJNA1240804_P_NODE_76140_length_189_cov_1.385714_g75774_i0 PRJNA1240804 76140 189 1.385714 2.61899946 Leptocylindrus danicus 163516 SAR_Eukaryotes SAR_Eukaryotes 303 4.06e-78   NTclustered gi|542139363|gb|KC894139.1| 163516 g75774 i0 100 48.5925925925926 164 0 87 0 26 189 257 94 Leptocylindrus danicus strain SZN-B706 28S ribosomal RNA gene, partial sequence blastn 9184 303 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Leptocylindrales Leptocylindraceae Leptocylindrus Leptocylindrus danicus
25276491 25276491 PRJNA1240804_P_NODE_7120_length_467_cov_6.167464_g6759_i0 PRJNA1240804 7120 467 6.167464 28.80205688 Bacillariaceae 33852 SAR_Eukaryotes SAR_Eukaryotes 688 0   NTclustered gi|2862228894|gb|PQ645528.1| 44447 g6759 i0 94.808 95.4732334047109 443 20 95 3 20 461 3904 3464 Pseudo-nitzschia delicatissima isolate AGSB0398 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 44586 688 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Pseudo-nitzschia Pseudo-nitzschia delicatissima
30533927 30533927 PRJNA1240804_P_NODE_114453_length_168_cov_0.873950_g114087_i0 PRJNA1240804 114453 168 0.87395 1.468236 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 86.3 2.89e-18   NR EJK44957.1 159749 g114087 i0 80.4 2.75 51 10 91.1 0 3 155 270 320 EJK44957.1 hypothetical protein THAOC_36465 [Thalassiosira oceanica] diamond 462 86.3 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira oceanica
30660365 30660365 PRJNA1240804_P_NODE_73093_length_191_cov_1.457746_g72727_i0 PRJNA1240804 73093 191 1.457746 2.78429486 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 99.8 1.59e-22   NR KAL3762442.1 259834 g72727 i0 80.7 3.59685863874346 57 11 89.5 0 15 185 584 640 KAL3762442.1 hypothetical protein ACHAWU_008145 [Discostella pseudostelligera] diamond 687 99.8 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Discostella Discostella pseudostelligera
31115876 31115876 PRJNA1240804_P_NODE_133495_length_165_cov_0.896552_g133129_i0 PRJNA1240804 133495 165 0.896552 1.4793108 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 95.9 6.63e-23   NR KAG7355908.1 303405 g133129 i0 100 0.909090909090909 50 0 90.9 0 16 165 5 54 KAG7355908.1 chlorophyll A-B binding protein [Nitzschia inconspicua] diamond 150 95.9 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
31969968 31969968 PRJNA1240804_P_NODE_110618_length_169_cov_0.866667_g110252_i0 PRJNA1240804 110618 169 0.866667 1.46466723 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 56.6 1.74e-7   NR KAG7366549.1 303405 g110252 i0 60.5 0.674556213017751 38 15 67.5 0 4 117 404 441 KAG7366549.1 hypothetical protein IV203_029219 [Nitzschia inconspicua] diamond 114 56.6 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;