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contig_metadata

8 rows where bioproject = "PRJNA1240804", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1240804 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1050431 1050431 PRJNA1240804_P_NODE_95221_length_176_cov_1.661417_g94855_i0 PRJNA1240804 95221 176 1.661417 2.92409392 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 165 1.83e-36   NTclustered gi|2294660140|gb|OP363691.1| 90962 g94855 i0 91.129 70.7784090909091 124 8 69 2 4 125 512 390 Cryptosporidium sp. isolate NJ3596 small subunit ribosomal RNA gene, partial sequence blastn 12457 165 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp.
4175169 4175169 PRJNA1240804_P_NODE_32684_length_257_cov_1.432692_g32318_i0 PRJNA1240804 32684 257 1.432692 3.68201844 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 82.4 2.98e-11   NTclustered gi|1039678902|gb|KX273387.1| 88456 g32318 i0 94.444 19.1789883268482 54 2 21 1 192 245 4482 4430 Cyclospora cayetanensis strain Texas-1 apicoplast, complete genome blastn 4929 82.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
8000927 8000927 PRJNA1240804_P_NODE_151767_length_161_cov_2.544643_g151401_i0 PRJNA1240804 151767 161 2.544643 4.09687523 Hepatozoon canis 110120 SAR_Eukaryotes SAR_Eukaryotes 80.5 6.14e-11   NTclustered gi|1584069862|gb|MH615006.1| 110120 g151401 i0 90.323 29.4596273291925 62 4 38 2 5 65 4982 4922 Hepatozoon canis isolate 9992 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 4743 80.5 1 Eukaryota Sar   Apicomplexa     Hepatozoidae Hepatozoon Hepatozoon canis
14377425 14377425 PRJNA1240804_P_NODE_48432_length_221_cov_2.250000_g48066_i0 PRJNA1240804 48432 221 2.25 4.9725 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 154 5.22e-33   NTclustered gi|160358922|gb|EU252544.1| 88456 g48066 i0 83.237 19.683257918552 173 24 78 5 3 175 1674 1507 Cyclospora cayetanensis 28S large subunit ribosomal RNA gene, partial sequence blastn 4350 154 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
20749476 20749476 PRJNA1240804_P_NODE_2877_length_664_cov_40.482927_g2552_i0 PRJNA1240804 2877 664 40.482927 268.80663528 Babesia sp. 35084 SAR_Eukaryotes SAR_Eukaryotes 196 2.89e-45   NTclustered gi|2315087675|gb|OP604185.1| 35084 g2552 i0 80.916 40.4126506024096 262 39 39 8 4 265 924 674 Babesia sp. isolate T4-2021 small subunit ribosomal RNA gene, partial sequence blastn 26834 196 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp.
24001944 24001944 PRJNA1240804_P_NODE_119379_length_167_cov_0.881356_g119013_i0 PRJNA1240804 119379 167 0.881356 1.47186452 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.014   NTclustered gi|820699808|tpe|LN714499.1| 432359 g119013 i0 100 0.335329341317365 28 0 17 0 128 155 5379652 5379679 TPA_asm: Toxoplasma gondii VEG, chromosome chrIX, complete genome blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
29631042 29631042 PRJNA1240804_P_NODE_66590_length_197_cov_1.371622_g66224_i0 PRJNA1240804 66590 197 1.371622 2.70209534 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 102 1.35e-24   NR XP_029215743.1 94643 g66224 i0 75 1.82741116751269 60 15 91.4 0 15 194 191 250 XP_029215743.1 ribosomal protein RPS4 [Besnoitia besnoiti] diamond 360 102 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
30691886 30691886 PRJNA1240804_P_NODE_128913_length_165_cov_1.784483_g128547_i0 PRJNA1240804 128913 165 1.784483 2.94439695 root 1 Root_unresolved Root_unresolved 59.3 1.8e-8   NR XP_013249558.1 5801 g128547 i0 61.5 3.50909090909091 39 15 70.9 0 48 164 23 61 XP_013249558.1 5-aminolevulinic acid synthase, putative [Eimeria acervulina] diamond 579 59.7 0.993299832495812 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;