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contig_metadata

17 rows where bioproject = "PRJNA1240804", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 17 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 17 ✖

bioproject 1

  • PRJNA1240804 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5452564 5452564 PRJNA1240804_P_NODE_83225_length_184_cov_1.533333_g82859_i0 PRJNA1240804 83225 184 1.533333 2.82133272 Deroceras reticulatum 145610 Mollusca Mollusca 296 6.57e-76   NTclustered gi|1273386133|gb|KX959514.1| 145610 g82859 i0 98.795 91.5380434782609 166 2 90 0 5 170 720 555 Deroceras reticulatum 28S ribosomal RNA gene, partial sequence blastn 16843 296 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Agriolimacidae Deroceras Deroceras reticulatum
9275116 9275116 PRJNA1240804_P_NODE_111008_length_169_cov_0.866667_g110642_i0 PRJNA1240804 111008 169 0.866667 1.46466723 Pomacea canaliculata 400727 Mollusca Mollusca 52.8 0.014   NTclustered gi|1397726079|ref|XM_025254298.1| 400727 g110642 i0 90 0.236686390532544 40 4 24 0 61 100 861 900 PREDICTED: Pomacea canaliculata protein DEK-like (LOC112573717), mRNA blastn 40 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
9275993 9275993 PRJNA1240804_P_NODE_21248_length_304_cov_3.462745_g20882_i0 PRJNA1240804 21248 304 3.462745 10.5267448 Cornu aspersum 6535 Mollusca Mollusca 523 4.989999999999998e-144   NTclustered gi|2644119680|gb|PP069353.1| 6535 g20882 i0 99.308 146.611842105263 289 2 95 0 3 291 3024 2736 Cornu aspersum isolate hlxa 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 44570 523 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Helicidae Cornu Cornu aspersum
10552178 10552178 PRJNA1240804_P_NODE_3669_length_605_cov_4.787770_g3328_i0 PRJNA1240804 3669 605 4.78777 28.9660085 Cornu aspersum 6535 Mollusca Mollusca 1112 0   NTclustered gi|2644119680|gb|PP069353.1| 6535 g3328 i0 99.835 154.695867768595 605 1 100 0 1 605 1004 1608 Cornu aspersum isolate hlxa 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 93591 1112 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Helicidae Cornu Cornu aspersum
11253219 11253219 PRJNA1240804_P_NODE_122049_length_167_cov_0.881356_g121683_i0 PRJNA1240804 122049 167 0.881356 1.47186452 Cephalopoda 6605 Mollusca Mollusca 283 4.56e-72   NTclustered gi|1707061938|dbj|LC458522.1| 34570 g121683 i0 100 77.4491017964072 153 0 92 0 1 153 647 495 Sepioteuthis lessoniana Lessoniana-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence blastn 12934 283 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Myopsida Loliginidae Sepioteuthis Sepioteuthis lessoniana
13101598 13101598 PRJNA1240804_P_NODE_21071_length_305_cov_3.484375_g20705_i0 PRJNA1240804 21071 305 3.484375 10.62734375 Bradybaena similaris 145626 Mollusca Mollusca 460 3.99e-125   NTclustered gi|2913001816|dbj|AP039609.1| 145626 g20705 i0 95.189 170.937704918033 291 14 95 0 15 305 1529 1239 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 28, sequence blastn 52136 460 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
13803664 13803664 PRJNA1240804_P_NODE_52931_length_214_cov_3.327273_g52565_i0 PRJNA1240804 52931 214 3.327273 7.12036422 Helicidae 6533 Mollusca Mollusca 370 4.58e-98   NTclustered gi|2644119680|gb|PP069353.1| 6535 g52565 i0 100 144.710280373832 200 0 93 0 15 214 2038 2237 Cornu aspersum isolate hlxa 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 30968 370 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Helicidae Cornu Cornu aspersum
15077831 15077831 PRJNA1240804_P_NODE_54712_length_212_cov_1.453988_g54346_i0 PRJNA1240804 54712 212 1.453988 3.08245456 Metazoa 33208 Mollusca Mollusca 366 5.86e-97   NTclustered gi|1928112764|gb|MT947788.1| 6523 g54346 i0 100 93.3962264150943 198 0 93 0 15 212 1121 1318 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 19800 366 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
18198694 18198694 PRJNA1240804_P_NODE_117415_length_167_cov_1.762712_g117049_i0 PRJNA1240804 117415 167 1.762712 2.94372904 Bradybaena similaris 145626 Mollusca Mollusca 62.1 2.33e-5   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g117049 i0 82.192 0.437125748502994 73 11 43 1 28 98 63097219 63097147 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 73 62.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20176386 20176386 PRJNA1240804_P_NODE_42856_length_231_cov_3.456044_g42490_i0 PRJNA1240804 42856 231 3.456044 7.98346164 Stylommatophora 6527 Mollusca Mollusca 425 1.0599999999999999e-114   NTclustered gi|2644119680|gb|PP069353.1| 6535 g42490 i0 100 99.5670995670996 230 0 99 0 2 231 825 596 Cornu aspersum isolate hlxa 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23000 425 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Helicidae Cornu Cornu aspersum
22727385 22727385 PRJNA1240804_P_NODE_97898_length_175_cov_0.968254_g97532_i0 PRJNA1240804 97898 175 0.968254 1.6944445 Nudibranchia 70849 Mollusca Mollusca 52.8 0.015   NTclustered gi|13591651|gb|AF249196.1| 71480 g97532 i0 100 9.76 28 0 16 0 15 42 92 119 Armina lovenii 18S ribosomal RNA gene, complete sequence blastn 1708 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Nudibranchia Arminidae Armina Armina lovenii
24573303 24573303 PRJNA1240804_P_NODE_11800_length_383_cov_1.850299_g11435_i0 PRJNA1240804 11800 383 1.850299 7.08664517 Cornu aspersum 6535 Mollusca Mollusca 459 1.84e-124   NTclustered gi|298573172|gb|HM179145.1| 6535 g11435 i0 99.602 100.21409921671 251 1 66 0 1 251 346 96 Helix aspersa 18S ribosomal RNA gene, partial sequence blastn 38382 459 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Helicidae Cornu Cornu aspersum
27249699 27249699 PRJNA1240804_P_NODE_41523_length_234_cov_2.248649_g41157_i0 PRJNA1240804 41523 234 2.248649 5.26183866 Opisthokonta 33154 Mollusca Mollusca 65.5 3.23e-10   NR KAK6167008.1 87958 g41157 i0 44.3 4.64102564102564 70 39 89.7 0 9 218 405 474 KAK6167008.1 hypothetical protein SNE40_021121 [Patella caerulea] diamond 1086 65.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella caerulea
28589498 28589498 PRJNA1240804_P_NODE_119347_length_167_cov_0.881356_g118981_i0 PRJNA1240804 119347 167 0.881356 1.47186452 Crassostrea virginica 6565 Mollusca Mollusca 70.5 2.19e-12   NR XP_022315529.1 6565 g118981 i0 90.6 2.29940119760479 32 3 57.5 0 70 165 939 970 XP_022315529.1 DNA-directed RNA polymerase I subunit RPA1-like [Crassostrea virginica] diamond 384 70.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
30768654 30768654 PRJNA1240804_P_NODE_150974_length_162_cov_0.920354_g150608_i0 PRJNA1240804 150974 162 0.920354 1.49097348 Magallana gigas 29159 Mollusca Mollusca 52.4 5.04e-6   NR XP_011416541.3 29159 g150608 i0 52.3 4.05555555555556 44 21 81.5 0 19 150 261 304 XP_011416541.3 diacylglycerol kinase epsilon [Magallana gigas] diamond 657 52.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
32146522 32146522 PRJNA1240804_P_NODE_67338_length_196_cov_1.734694_g66972_i0 PRJNA1240804 67338 196 1.734694 3.40000024 Opisthokonta 33154 Mollusca Mollusca 43.1 0.0147   NR CAG2204468.1 6550 g66972 i0 32.1 1.53061224489796 56 38 85.7 0 172 5 105 160 CAG2204468.1 unnamed protein product [Mytilus edulis] diamond 300 43.5 0.990804597701149 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
32620768 32620768 PRJNA1240804_P_NODE_131020_length_165_cov_0.896552_g130654_i0 PRJNA1240804 131020 165 0.896552 1.4793108 Metazoa 33208 Mollusca Mollusca 59.3 1.81e-8   NR XP_052816977.1 6604 g130654 i0 52 35.4545454545455 50 24 90.9 0 151 2 189 238 XP_052816977.1 H(+)/Cl(-) exchange transporter 7-like [Mya arenaria] diamond 5850 59.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;