RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1240804", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1240804 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29252192 29252192 PRJNA1240804_P_NODE_149089_length_162_cov_0.920354_g148723_i0 PRJNA1240804 149089 162 0.920354 1.49097348 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 104 2.46e-24   NR MCB5252416.1 2030808 g148723 i0 84.9 1.96296296296296 53 8 98.1 0 2 160 126 178 MCB5252416.1 S8 family serine peptidase [Candidatus Cloacimonadota bacterium] diamond 318 104 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32019917 32019917 PRJNA1240804_P_NODE_45258_length_227_cov_1.089888_g44892_i0 PRJNA1240804 45258 227 1.089888 2.47404576 Pseudomonadati 3379134 Bacteria Bacteria 91.3 6.05e-20   NR MCK9178937.1 2030808 g44892 i0 65.2 6.33039647577093 69 24 91.2 0 219 13 96 164 MCK9178937.1 tyrosine-type recombinase/integrase [Candidatus Cloacimonadota bacterium] diamond 1437 91.3 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;