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contig_metadata

10 rows where bioproject = "PRJNA1240804", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 10 ✖

tax_clade 1

  • Discoba · 10 ✖

bioproject 1

  • PRJNA1240804 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2325436 2325436 PRJNA1240804_P_NODE_152222_length_159_cov_4.272727_g151856_i0 PRJNA1240804 152222 159 4.272727 6.79363593 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 241 2.62e-59   NTclustered gi|225216789|gb|FJ176704.1| 75058 g151856 i0 96.552 93.5534591194968 145 5 91 0 15 159 216 360 Bodo saltans HFCC12 28S ribosomal RNA gene, partial sequence blastn 14875 241 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
5452074 5452074 PRJNA1240804_P_NODE_57465_length_208_cov_1.767296_g57099_i0 PRJNA1240804 57465 208 1.767296 3.67597568 root 1 Root_unresolved Root_unresolved 100 2.73e-24   NR CUG51369.1 75058 g57099 i0 73.4 17.5096153846154 64 17 92.3 0 193 2 159 222 CUG51369.1 elongation factor 1 alpha, putative, partial [Bodo saltans] diamond 3642 101 0.99009900990099 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
7428351 7428351 PRJNA1240804_P_NODE_98486_length_174_cov_1.616000_g98120_i0 PRJNA1240804 98486 174 1.616 2.81184 Petalomonas 56451 Euglenozoa other_Eukaryota 171 3.87e-38   NTclustered gi|2228698|gb|U84731.1|PCU84731 56452 g98120 i0 98.947 39.5747126436782 95 1 55 0 15 109 1626 1720 Petalomonas cantuscygni small subunit ribosomal RNA gene, complete sequence blastn 6886 172 0.994186046511628 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
10550856 10550856 PRJNA1240804_P_NODE_106809_length_169_cov_1.333333_g106443_i0 PRJNA1240804 106809 169 1.333333 2.25333277 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 233 4.7e-57   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g106443 i0 91.716 147.905325443787 169 12 99 2 3 169 4652 4484 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 24996 233 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
17628139 17628139 PRJNA1240804_P_NODE_80814_length_186_cov_1.262774_g80448_i0 PRJNA1240804 80814 186 1.262774 2.34875964 Peranema 3287 Euglenozoa other_Eukaryota 291 3.1e-74   NTclustered gi|1803019098|gb|MT007870.1| 56466 g80448 i0 97.093 5.29032258064516 172 5 92 0 1 172 1187 1016 Peranema trichophorum strain PtR small subunit ribosomal RNA gene, partial sequence blastn 984 291 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
19473779 19473779 PRJNA1240804_P_NODE_16696_length_334_cov_3.122807_g16331_i0 PRJNA1240804 16696 334 3.122807 10.43017538 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 102 3.08e-17   NTclustered gi|560190589|gb|KF633467.1| 91374 g16331 i0 82.203 25.5748502994012 118 21 35 0 51 168 3158 3275 Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence blastn 8542 102 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
19474288 19474288 PRJNA1240804_P_NODE_38436_length_241_cov_2.416667_g38070_i0 PRJNA1240804 38436 241 2.416667 5.82416747 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 272 1.5299999999999999e-68   NTclustered gi|31323484|gb|AF386635.1| 56452 g38070 i0 89.286 17.9294605809129 224 14 93 5 14 237 934 1147 Petalomonas cantuscygni CCAP 1259/1 small subunit ribosomal RNA gene, partial sequence blastn 4321 272 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
22024968 22024968 PRJNA1240804_P_NODE_40658_length_236_cov_1.668449_g40292_i0 PRJNA1240804 40658 236 1.668449 3.93753964 Neobodo designis 312471 Euglenozoa other_Eukaryota 385 1.84e-102   NTclustered gi|1476664123|gb|MH917128.1| 312471 g40292 i0 97.768 93.7372881355932 224 4 94 1 14 236 356 579 Neobodo designis isolate M1-19 small subunit ribosomal RNA gene, partial sequence blastn 22122 385 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
22727025 22727025 PRJNA1240804_P_NODE_16498_length_336_cov_1.574913_g16133_i0 PRJNA1240804 16498 336 1.574913 5.29170768 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 381 3.5599999999999995e-101   NTclustered gi|2414483|emb|Y00055.1| 5656 g16133 i0 94.737 103.58630952381 247 10 74 2 4 250 8308 8065 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 34805 381 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
23300325 23300325 PRJNA1240804_P_NODE_26099_length_281_cov_1.159483_g25733_i0 PRJNA1240804 26099 281 1.159483 3.25814723 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 407 4.8e-109   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g25733 i0 93.75 156.708185053381 272 15 96 1 10 279 4341 4612 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 44035 407 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;