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contig_metadata

7 rows where bioproject = "PRJNA1240804", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 7 ✖

tax_clade 1

  • Bacteria candidate phyla · 7 ✖

bioproject 1

  • PRJNA1240804 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5452486 5452486 PRJNA1240804_P_NODE_79285_length_187_cov_1.333333_g78919_i0 PRJNA1240804 79285 187 1.333333 2.49333271 uncultured Methylomirabilota bacterium 991135 Bacteria Bacteria 54.7 0.004   NTclustered gi|2874253892|emb|OY970067.1| 991135 g78919 i0 92.308 0.20855614973262 39 2 20 1 79 116 2900642 2900680 MAG: uncultured candidate division NC10 bacterium isolate MFD01231.bin.c.1 genome assembly, chromosome: 1 blastn 39 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         uncultured Methylomirabilota bacterium
6726007 6726007 PRJNA1240804_P_NODE_39946_length_238_cov_1.026455_g39580_i0 PRJNA1240804 39946 238 1.026455 2.4429629 Pseudomonadati 3379134 Bacteria Bacteria 78.6 7.98e-15   NR HEV8441405.1 2072417 g39580 i0 77.8 3.42857142857143 54 12 68.1 0 223 62 408 461 HEV8441405.1 class II fumarate hydratase [Candidatus Methylomirabilota bacterium] diamond 816 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27041946 27041946 PRJNA1240804_P_NODE_72502_length_192_cov_0.986014_g72136_i0 PRJNA1240804 72502 192 0.986014 1.89314688 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 42.7 0.0191   NR HZS34569.1 2072417 g72136 i0 43.9 0.890625 57 31 87.5 1 186 19 275 331 HZS34569.1 prolipoprotein diacylglyceryl transferase [Candidatus Methylomirabilota bacterium] diamond 171 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28305123 28305123 PRJNA1240804_P_NODE_107506_length_169_cov_0.866667_g107140_i0 PRJNA1240804 107506 169 0.866667 1.46466723 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 48.9 9.25e-5   NR HWN97073.1 2072417 g107140 i0 37.5 1.95266272189349 56 35 99.4 0 2 169 478 533 HWN97073.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 330 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30010506 30010506 PRJNA1240804_P_NODE_66971_length_197_cov_0.959459_g66605_i0 PRJNA1240804 66971 197 0.959459 1.89013423 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 63.5 9.05e-10   NR NJD69336.1 2072417 g66605 i0 82.1 0.593908629441624 39 7 59.4 0 8 124 8 46 NJD69336.1 TonB-dependent receptor [Candidatus Methylomirabilota bacterium] diamond 117 63.5 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30818361 30818361 PRJNA1240804_P_NODE_121234_length_167_cov_0.881356_g120868_i0 PRJNA1240804 121234 167 0.881356 1.47186452 Pseudomonadati 3379134 Bacteria Bacteria 95.9 9.98e-22   NR HTZ31349.1 2072417 g120868 i0 85.7 6.16167664670659 49 7 88 0 162 16 214 262 HTZ31349.1 NAD(P)/FAD-dependent oxidoreductase [Candidatus Methylomirabilota bacterium] diamond 1029 96.3 0.995846313603323 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31355753 31355753 PRJNA1240804_P_NODE_137116_length_164_cov_0.904348_g136750_i0 PRJNA1240804 137116 164 0.904348 1.48313072 Pseudomonadati 3379134 Bacteria Bacteria 51.2 1.29e-5   NR HEX2441991.1 2072417 g136750 i0 60.5 3.16463414634146 43 17 78.7 0 160 32 129 171 HEX2441991.1 cytochrome c/FTR1 family iron permease [Candidatus Methylomirabilota bacterium] diamond 519 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;