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contig_metadata

31 rows where bioproject = "PRJNA1240804", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 31 ✖

tax_clade 1

  • Amoebozoa · 31 ✖

bioproject 1

  • PRJNA1240804 · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
347610 347610 PRJNA1240804_P_NODE_18741_length_319_cov_5.511111_g18375_i0 PRJNA1240804 18741 319 5.511111 17.58044409 Vannella septentrionalis 197531 Discosea other_Eukaryota 481 3.22e-131   NTclustered gi|300078499|gb|GU001161.1| 197531 g18375 i0 95.364 76.9811912225705 302 14 95 0 15 316 2351 2652 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24557 481 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
1621336 1621336 PRJNA1240804_P_NODE_101202_length_172_cov_2.699187_g100836_i0 PRJNA1240804 101202 172 2.699187 4.64260164 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 145 2.31e-30   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g100836 i0 85.616 46.8953488372093 146 11 81 9 26 164 1923 1781 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 8066 145 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
1622981 1622981 PRJNA1240804_P_NODE_4702_length_550_cov_7.371257_g4351_i0 PRJNA1240804 4702 550 7.371257 40.5419135 Vexillifera fluvialis 1105343 Discosea other_Eukaryota 582 1.55e-161   NTclustered gi|354720323|gb|HQ687482.1| 1105343 g4351 i0 90.222 30.7072727272727 450 38 89 6 49 495 449 3 Vexillifera fluvialis strain RR1 small subunit ribosomal RNA gene, partial sequence blastn 16889 582 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera fluvialis
1623124 1623124 PRJNA1240804_P_NODE_54382_length_212_cov_3.957055_g54016_i0 PRJNA1240804 54382 212 3.957055 8.3889566 Vannella sp. COHH 62 943212 Discosea other_Eukaryota 366 5.86e-97   NTclustered gi|319659359|gb|GU320596.1| 943212 g54016 i0 100 88.3018867924528 198 0 93 0 1 198 980 783 Vannella sp. COHH 62 18S ribosomal RNA gene, partial sequence blastn 18720 366 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. COHH 62
2898360 2898360 PRJNA1240804_P_NODE_146023_length_162_cov_2.283186_g145657_i0 PRJNA1240804 146023 162 2.283186 3.69876132 Vannella septentrionalis 197531 Discosea other_Eukaryota 274 2.64e-69   NTclustered gi|300078499|gb|GU001161.1| 197531 g145657 i0 100 91.8148148148148 148 0 91 0 1 148 3825 3678 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14874 274 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
2899425 2899425 PRJNA1240804_P_NODE_58083_length_207_cov_2.594937_g57717_i0 PRJNA1240804 58083 207 2.594937 5.37151959 Protacanthamoeba bohemica 325062 Discosea other_Eukaryota 89.8 1.38e-13   NTclustered gi|2806326584|gb|PQ345834.1| 325062 g57717 i0 81.452 6.31400966183575 124 10 57 7 75 193 355 240 Protacanthamoeba bohemica isolate 6FSb1 small subunit ribosomal RNA gene, partial sequence blastn 1307 89.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Protacanthamoeba Protacanthamoeba bohemica
3600667 3600667 PRJNA1240804_P_NODE_16003_length_340_cov_1.477663_g15638_i0 PRJNA1240804 16003 340 1.477663 5.0240542 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 592 1.5299999999999996e-164   NTclustered gi|62865929|gb|AY929904.1| 325081 g15638 i0 99.387 94.2205882352941 326 2 96 0 15 340 1527 1852 Vannella sp. strain S2M2/I 18S small subunit ribosomal RNA gene, partial sequence blastn 32035 597 0.991624790619765 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain S2M2/I
4174968 4174968 PRJNA1240804_P_NODE_23604_length_292_cov_2.744856_g23238_i0 PRJNA1240804 23604 292 2.744856 8.01497952 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 303 6.77e-78   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g23238 i0 86.477 20.3630136986301 281 32 95 6 15 292 938 1215 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 5946 303 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
4175397 4175397 PRJNA1240804_P_NODE_42904_length_231_cov_2.439560_g42538_i0 PRJNA1240804 42904 231 2.43956 5.6353836 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 60.2 1.23e-4   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g42538 i0 100 1.43722943722944 32 0 14 0 65 96 877 846 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 332 60.2 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
8000359 8000359 PRJNA1240804_P_NODE_117247_length_167_cov_2.144068_g116881_i0 PRJNA1240804 117247 167 2.144068 3.58059356 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 226 7.799999999999999e-55   NTclustered gi|300078498|gb|GU001160.1| 5755 g116881 i0 92.547 44.844311377245504 161 7 93 3 12 167 5326 5166 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7489 226 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8000950 8000950 PRJNA1240804_P_NODE_153307_length_156_cov_2.046729_g152941_i0 PRJNA1240804 153307 156 2.046729 3.19289724 Ripella tribonemae 2047823 Discosea other_Eukaryota 257 2.54e-64   NTclustered gi|1269228475|gb|MF683600.1| 2047823 g152941 i0 99.301 87.2628205128205 143 0 91 1 14 155 684 826 Ripella tribonemae clone 22.9.6 18S ribosomal RNA gene, partial sequence blastn 13613 257 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
9277027 9277027 PRJNA1240804_P_NODE_6828_length_475_cov_3.314554_g6468_i0 PRJNA1240804 6828 475 3.3145539999999998 15.7441315 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 300 1.5e-76   NTclustered gi|300078498|gb|GU001160.1| 5755 g6468 i0 89.431 0.972631578947368 246 15 92 9 227 461 5819 5574 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 462 300 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9978224 9978224 PRJNA1240804_P_NODE_26908_length_277_cov_6.627193_g26542_i0 PRJNA1240804 26908 277 6.627193 18.35732461 Paramoeba 200890 Discosea other_Eukaryota 76.8 1.51e-9   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g26542 i0 100 0.296028880866426 41 0 15 0 237 277 42743 42783 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 82 76.8 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
11827150 11827150 PRJNA1240804_P_NODE_51550_length_216_cov_3.550898_g51184_i0 PRJNA1240804 51550 216 3.550898 7.66993968 Paravannella minima 1443144 Discosea other_Eukaryota 368 1.67e-97   NTclustered gi|571331048|gb|KF895375.1| 1443144 g51184 i0 100 44.5648148148148 199 0 92 0 4 202 987 789 Paravannella minima strain CCAP 1533/1 18S ribosomal RNA gene, partial sequence blastn 9626 368 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
13803716 13803716 PRJNA1240804_P_NODE_64511_length_199_cov_2.433333_g64145_i0 PRJNA1240804 64511 199 2.433333 4.84233267 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 76.8 1.02e-9   NTclustered gi|300078498|gb|GU001160.1| 5755 g64145 i0 81.609 0.658291457286432 87 13 43 3 6 90 7831 7746 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 131 76.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14378028 14378028 PRJNA1240804_P_NODE_78072_length_188_cov_1.129496_g77706_i0 PRJNA1240804 78072 188 1.129496 2.12345248 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 265 1.9000000000000001e-66   NTclustered gi|300078498|gb|GU001160.1| 5755 g77706 i0 95.758 3.03723404255319 165 5 87 2 1 163 6945 6781 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 571 265 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16924737 16924737 PRJNA1240804_P_NODE_147014_length_162_cov_1.318584_g146648_i0 PRJNA1240804 147014 162 1.318584 2.13610608 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 209 7.56e-50   NTclustered gi|300078498|gb|GU001160.1| 5755 g146648 i0 92.053 0.932098765432099 151 8 92 2 1 149 7786 7638 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 151 209 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18199069 18199069 PRJNA1240804_P_NODE_140295_length_163_cov_2.236842_g139929_i0 PRJNA1240804 140295 163 2.236842 3.64605246 Acanthamoeba sp. UWE2 167755 Discosea other_Eukaryota 274 2.66e-69   NTclustered gi|15127813|gb|AF352388.1| 167755 g139929 i0 97.516 91.4846625766871 161 3 98 1 4 163 2073 2233 Acanthamoeba sp. UWE2 18S ribosomal RNA gene, partial sequence blastn 14912 274 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp. UWE2
18200373 18200373 PRJNA1240804_P_NODE_62775_length_201_cov_2.440789_g62409_i0 PRJNA1240804 62775 201 2.440789 4.90598589 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 340 3.33e-89   NTclustered gi|300078498|gb|GU001160.1| 5755 g62409 i0 99.465 68.3034825870647 187 1 93 0 15 201 7476 7662 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13729 340 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19472952 19472952 PRJNA1240804_P_NODE_109076_length_169_cov_0.866667_g108710_i0 PRJNA1240804 109076 169 0.866667 1.46466723 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 272 9.95e-69   NTclustered gi|354720325|gb|HQ687484.1| 1105345 g108710 i0 98.693 1.81065088757396 153 2 91 0 3 155 866 714 Vexillifera bacillipedes strain TIL2 small subunit ribosomal RNA gene, partial sequence blastn 306 272 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
19474760 19474760 PRJNA1240804_P_NODE_5956_length_502_cov_3.231788_g5598_i0 PRJNA1240804 5956 502 3.231788 16.22357576 Vexillifera fluvialis 1105343 Discosea other_Eukaryota 348 5.59e-91   NTclustered gi|354720323|gb|HQ687482.1| 1105343 g5598 i0 84.469 44.2609561752988 367 42 72 15 129 488 1559 1201 Vexillifera fluvialis strain RR1 small subunit ribosomal RNA gene, partial sequence blastn 22219 348 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera fluvialis
19475036 19475036 PRJNA1240804_P_NODE_74376_length_190_cov_1.794326_g74010_i0 PRJNA1240804 74376 190 1.794326 3.4092194 Vannella septentrionalis 197531 Discosea other_Eukaryota 292 8.83e-75   NTclustered gi|300078499|gb|GU001161.1| 197531 g74010 i0 96.591 17.3947368421053 176 6 93 0 1 176 3149 2974 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3305 292 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
20176413 20176413 PRJNA1240804_P_NODE_49716_length_219_cov_2.017647_g49350_i0 PRJNA1240804 49716 219 2.017647 4.41864693 Protacanthamoeba 325061 Discosea other_Eukaryota 357 3.67e-94   NTclustered gi|62825358|gb|AY960120.1| 325062 g49350 i0 98.058 93.972602739726 206 3 94 1 15 219 1686 1891 Protacanthamoeba bohemica small subunit ribosomal RNA gene, complete sequence blastn 20580 357 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Protacanthamoeba Protacanthamoeba bohemica
20749240 20749240 PRJNA1240804_P_NODE_18917_length_318_cov_3.241636_g18551_i0 PRJNA1240804 18917 318 3.241636 10.30840248 Vannella septentrionalis 197531 Discosea other_Eukaryota 508 1.47e-139   NTclustered gi|300078499|gb|GU001161.1| 197531 g18551 i0 97.324 90.9465408805032 299 8 94 0 15 313 874 1172 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 28921 508 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
22025559 22025559 PRJNA1240804_P_NODE_68158_length_195_cov_2.089041_g67792_i0 PRJNA1240804 68158 195 2.089041 4.07362995 Vannella septentrionalis 197531 Discosea other_Eukaryota 322 1.16e-83   NTclustered gi|300078499|gb|GU001161.1| 197531 g67792 i0 96.41 74.4615384615385 195 7 100 0 1 195 1673 1867 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14520 322 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
24002278 24002278 PRJNA1240804_P_NODE_54019_length_213_cov_1.323171_g53653_i0 PRJNA1240804 54019 213 1.323171 2.81835423 Acanthamoeba 5754 Discosea other_Eukaryota 394 2.7e-105   NTclustered gi|2044079968|gb|MZ272159.1| 5756 g53653 i0 100 99.5117370892019 213 0 100 0 1 213 1308 1520 Acanthamoeba sp. isolate AcWT29 small subunit ribosomal RNA gene, partial sequence blastn 21196 394 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
24573788 24573788 PRJNA1240804_P_NODE_145920_length_162_cov_2.796460_g145554_i0 PRJNA1240804 145920 162 2.79646 4.5302652 Vannella septentrionalis 197531 Discosea other_Eukaryota 270 3.4199999999999993e-68   NTclustered gi|300078499|gb|GU001161.1| 197531 g145554 i0 100 1.28395061728395 146 0 90 0 15 160 3470 3615 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 208 270 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
24574680 24574680 PRJNA1240804_P_NODE_48680_length_221_cov_1.273256_g48314_i0 PRJNA1240804 48680 221 1.273256 2.81389576 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 54.7 0.005   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g48314 i0 100 0.131221719457014 29 0 13 0 52 80 33219 33191 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 29 54.7 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
27294784 27294784 PRJNA1240804_P_NODE_70683_length_193_cov_1.326389_g70317_i0 PRJNA1240804 70683 193 1.326389 2.55993077 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 52.4 7.81e-6   NR XP_004352515.1 1257118 g70317 i0 52.3 1.44559585492228 44 21 68.4 0 172 41 278 321 XP_004352515.1 GTPaseactivator protein for Ras-like GTPase [Acanthamoeba castellanii str. Neff] diamond 279 52.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27705671 27705671 PRJNA1240804_P_NODE_133344_length_165_cov_0.896552_g132978_i0 PRJNA1240804 133344 165 0.896552 1.4793108 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 42.7 0.0129   NR NP_042541.1 5755 g132978 i0 52.8 1.2 36 17 65.5 0 113 6 25 60 NP_042541.1 H(+)-transporting ATPasesubunit 1 [Acanthamoeba castellanii] diamond 198 42.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28115709 28115709 PRJNA1240804_P_NODE_89765_length_180_cov_1.236641_g89399_i0 PRJNA1240804 89765 180 1.236641 2.2259538 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 42.7 0.0101   NR XP_004339586.1 1257118 g89399 i0 42.6 1.8 54 31 90 0 162 1 26 79 XP_004339586.1 uncharacterized protein ACA1_063370 [Acanthamoeba castellanii str. Neff] diamond 324 42.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;