RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1237888", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1237888 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22023474 22023474 PRJNA1237888_S_NODE_6838_length_165_cov_0.896552_g6788_i0 PRJNA1237888 6838 165 0.896552 1.4793108 Potyvirus papayanuli 3240577 Viruses Viruses 239 9.87e-59   NTclustered gi|161168458|dbj|AB369277.1| 12205 g6788 i0 92.727 32.6969696969697 165 12 100 0 1 165 5646 5810 Papaya ringspot virus genomic RNA, complete genome, strain: Korean watermelon blastn 5395 239 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus papayanuli
30231408 30231408 PRJNA1237888_S_NODE_6732_length_165_cov_1.637931_g6682_i0 PRJNA1237888 6732 165 1.637931 2.70258615 Picornaviridae sp. 1530251 Viruses Viruses 84.3 1.52e-17   NR URG14862.1 1530251 g6682 i0 78.7 0.854545454545454 47 10 85.5 0 2 142 59 105 URG14862.1 MAG: RNA dependent RNA polymerase, partial [Picornaviridae sp.] diamond 141 84.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;