contig_metadata
14 rows where bioproject = "PRJNA1237888", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 346536 | 346536 | PRJNA1237888_S_NODE_21_length_1679_cov_4.698160_g11_i0 | PRJNA1237888 | 21 | 1679 | 4.69816 | 78.8821064 | Terriglobus roseus | 392734 | Bacteria | Bacteria | 2663 | 0 | NTclustered | gi|390410848|gb|CP003379.1| | 926566 | g11 | i0 | 95.298 | 103.935080405003 | 1680 | 77 | 100 | 2 | 1 | 1679 | 2078788 | 2077110 | Terriglobus roseus DSM 18391, complete genome | blastn | 174507 | 2663 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terriglobus | Terriglobus roseus | ||
| 346541 | 346541 | PRJNA1237888_S_NODE_3261_length_225_cov_1.477273_g3211_i0 | PRJNA1237888 | 3261 | 225 | 1.477273 | 3.32386425 | uncultured Granulicella sp. | 1241325 | Bacteria | Bacteria | 405 | 1.33e-108 | NTclustered | gi|2836016426|emb|OZ196157.1| | 1241325 | g3211 | i0 | 99.111 | 25.2177777777778 | 225 | 2 | 100 | 0 | 1 | 225 | 1019507 | 1019731 | MAG: uncultured Granulicella sp. isolate 532c3363-cb9a-4ff4-a964-62ae8f4e4543 genome assembly, chromosome: 1 | blastn | 5674 | 405 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | uncultured Granulicella sp. | ||
| 4173799 | 4173799 | PRJNA1237888_S_NODE_1744_length_314_cov_2.781132_g1694_i0 | PRJNA1237888 | 1744 | 314 | 2.781132 | 8.73275448 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 363 | 1.1999999999999999e-95 | NTclustered | gi|2874254027|emb|OY970352.1| | 171953 | g1694 | i0 | 89.31 | 88.4140127388535 | 290 | 29 | 92 | 2 | 1 | 289 | 2366983 | 2367271 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 | blastn | 27762 | 363 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 6724487 | 6724487 | PRJNA1237888_S_NODE_1046_length_389_cov_5.094118_g996_i0 | PRJNA1237888 | 1046 | 389 | 5.094118 | 19.81611902 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 669 | 0 | NTclustered | gi|157142428|gb|EU122699.1| | 171953 | g996 | i0 | 97.686 | 99.1182519280206 | 389 | 9 | 100 | 0 | 1 | 389 | 14 | 402 | Uncultured Acidobacteria bacterium clone KL2-068 16S ribosomal RNA gene, partial sequence | blastn | 38557 | 669 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 8000035 | 8000035 | PRJNA1237888_S_NODE_7127_length_163_cov_2.473684_g7077_i0 | PRJNA1237888 | 7127 | 163 | 2.473684 | 4.03210492 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 268 | 1.24e-67 | NTclustered | gi|2874253710|emb|OY969475.1| | 2283092 | g7077 | i0 | 96.341 | 314.791411042945 | 164 | 5 | 100 | 1 | 1 | 163 | 1821173 | 1821336 | MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 | blastn | 51311 | 268 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 10550723 | 10550723 | PRJNA1237888_S_NODE_5909_length_170_cov_2.942149_g5859_i0 | PRJNA1237888 | 5909 | 170 | 2.942149 | 5.0016533 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 254 | 3.63e-63 | NTclustered | gi|2874253760|emb|OY969701.1| | 2283092 | g5859 | i0 | 93.567 | 286.317647058824 | 171 | 10 | 100 | 1 | 1 | 170 | 3176154 | 3176324 | MAG: Pyrinomonadaceae bacterium isolate MFD04212.bin.c.1 genome assembly, chromosome: 1 | blastn | 48674 | 254 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 13100507 | 13100507 | PRJNA1237888_S_NODE_6331_length_167_cov_4.601695_g6281_i0 | PRJNA1237888 | 6331 | 167 | 4.601695 | 7.68483065 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 174 | 2.87e-39 | NTclustered | gi|2874253710|emb|OY969475.1| | 2283092 | g6281 | i0 | 95.413 | 137.089820359281 | 109 | 5 | 65 | 0 | 1 | 109 | 1822650 | 1822542 | MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 | blastn | 22894 | 174 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 15649633 | 15649633 | PRJNA1237888_S_NODE_3753_length_210_cov_2.751553_g3703_i0 | PRJNA1237888 | 3753 | 210 | 2.751553 | 5.7782613 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 316 | 5.92e-82 | NTclustered | gi|2874253710|emb|OY969475.1| | 2283092 | g3703 | i0 | 93.81 | 47.0285714285714 | 210 | 13 | 100 | 0 | 1 | 210 | 1821944 | 1821735 | MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 | blastn | 9876 | 316 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 16923873 | 16923873 | PRJNA1237888_S_NODE_2894_length_238_cov_1.100529_g2844_i0 | PRJNA1237888 | 2894 | 238 | 1.100529 | 2.61925902 | Bryobacterales bacterium | 2026791 | Bacteria | Bacteria | 324 | 4.1e-84 | NTclustered | gi|2874253826|emb|OY969810.1| | 2026791 | g2844 | i0 | 91.176 | 147.31512605042 | 238 | 21 | 100 | 0 | 1 | 238 | 6660764 | 6661001 | MAG: Bryobacterales bacterium isolate MFD04967.bin.c.1 genome assembly, chromosome: 1 | blastn | 35061 | 324 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium | ||||
| 16923879 | 16923879 | PRJNA1237888_S_NODE_4214_length_200_cov_1.258278_g4164_i0 | PRJNA1237888 | 4214 | 200 | 1.258278 | 2.516556 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 353 | 4.25e-93 | NTclustered | gi|31789464|gb|AY281356.1| | 171953 | g4164 | i0 | 98.5 | 214.165 | 200 | 3 | 100 | 0 | 1 | 200 | 9230 | 9429 | Uncultured Acidobacteria bacterium clone 41b15 genomic sequence | blastn | 42833 | 353 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 21451634 | 21451634 | PRJNA1237888_S_NODE_2557_length_254_cov_6.000000_g2507_i0 | PRJNA1237888 | 2557 | 254 | 6 | 15.24 | Terriglobus | 392733 | Bacteria | Bacteria | 364 | 2.6099999999999993e-96 | NTclustered | gi|319923767|gb|CP002467.1| | 401053 | g2507 | i0 | 92.549 | 122.44094488189 | 255 | 17 | 100 | 2 | 1 | 254 | 3871428 | 3871681 | Terriglobus saanensis SP1PR4, complete genome | blastn | 31100 | 364 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terriglobus | Terriglobus saanensis | ||
| 22726772 | 22726772 | PRJNA1237888_S_NODE_7258_length_163_cov_0.912281_g7208_i0 | PRJNA1237888 | 7258 | 163 | 0.912281 | 1.48701803 | Bacteria | 2 | Bacteria | Bacteria | 92 | 9.31e-21 | NR | MBV8205153.1 | 1978231 | g7208 | i0 | 79.2 | 10.7484662576687 | 53 | 11 | 97.5 | 0 | 162 | 4 | 53 | 105 | MBV8205153.1 methyltransferase [Acidobacteriota bacterium] | diamond | 1752 | 92.4 | 0.995670995670996 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 23299083 | 23299083 | PRJNA1237888_S_NODE_2959_length_235_cov_3.811828_g2909_i0 | PRJNA1237888 | 2959 | 235 | 3.811828 | 8.9577958 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 385 | 1.83e-102 | NTclustered | gi|31789464|gb|AY281356.1| | 171953 | g2909 | i0 | 96.552 | 110.102127659574 | 232 | 8 | 99 | 0 | 4 | 235 | 11442 | 11211 | Uncultured Acidobacteria bacterium clone 41b15 genomic sequence | blastn | 25874 | 385 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 25275957 | 25275957 | PRJNA1237888_S_NODE_6180_length_168_cov_1.554622_g6130_i0 | PRJNA1237888 | 6180 | 168 | 1.554622 | 2.61176496 | Granulicella | 940557 | Bacteria | Bacteria | 305 | 9.81e-79 | NTclustered | gi|358750971|gb|CP003130.1| | 682795 | g6130 | i0 | 99.405 | 88.3511904761905 | 168 | 1 | 100 | 0 | 1 | 168 | 694822 | 694989 | Granulicella mallensis MP5ACTX8 chromosome, complete genome | blastn | 14843 | 305 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | Granulicella mallensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;