contig_metadata
11 rows where bioproject = "PRJNA1237888", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 346551 | 346551 | PRJNA1237888_S_NODE_5921_length_170_cov_1.859504_g5871_i0 | PRJNA1237888 | 5921 | 170 | 1.859504 | 3.1611568 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2891481993|emb|OZ219765.1| | 2026734 | g5871 | i0 | 84.211 | 2.17647058823529 | 57 | 9 | 34 | 0 | 19 | 75 | 1954198 | 1954142 | MAG: Dehalococcoidia bacterium isolate 2efd49d1-a845-418d-b650-c606456da4a2 genome assembly, chromosome: 2 | blastn | 370 | 56.5 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 4173810 | 4173810 | PRJNA1237888_S_NODE_2944_length_236_cov_1.053476_g2894_i0 | PRJNA1237888 | 2944 | 236 | 1.053476 | 2.48620336 | Tepidiformaceae bacterium | 3022862 | Bacteria | Bacteria | 169 | 2.01e-37 | NTclustered | gi|2531948656|emb|OY282446.1| | 3022862 | g2894 | i0 | 81.604 | 159.75 | 212 | 31 | 89 | 7 | 27 | 236 | 658465 | 658670 | MAG: Tepidiformaceae bacterium genome assembly, chromosome: 1 | blastn | 37701 | 169 | 1 | Bacteria | Bacillati | Chloroflexota | Tepidiformia | Tepidiformales | Tepidiformaceae | Tepidiformaceae bacterium | |||
| 4173814 | 4173814 | PRJNA1237888_S_NODE_3804_length_209_cov_1.950000_g3754_i0 | PRJNA1237888 | 3804 | 209 | 1.95 | 4.0755 | Ktedonobacteria bacterium brp13 | 2717365 | Bacteria | Bacteria | 130 | 8.230000000000001e-26 | NTclustered | gi|1915456248|dbj|AP024096.1| | 2717365 | g3754 | i0 | 78.431 | 10.2631578947368 | 204 | 40 | 97 | 4 | 6 | 207 | 792757 | 792556 | Ktedonobacteria bacterium brp13 DNA, complete genome | blastn | 2145 | 130 | 1 | Bacteria | Bacillati | Chloroflexota | Ktedonobacteria | Ktedonobacteria bacterium brp13 | |||||
| 4173832 | 4173832 | PRJNA1237888_S_NODE_6624_length_166_cov_0.888889_g6574_i0 | PRJNA1237888 | 6624 | 166 | 0.888889 | 1.47555574 | Ktedonobacteria bacterium brp13 | 2717365 | Bacteria | Bacteria | 206 | 1.01e-48 | NTclustered | gi|1915456248|dbj|AP024096.1| | 2717365 | g6574 | i0 | 89.157 | 30.7650602409639 | 166 | 17 | 100 | 1 | 1 | 166 | 793614 | 793450 | Ktedonobacteria bacterium brp13 DNA, complete genome | blastn | 5107 | 206 | 1 | Bacteria | Bacillati | Chloroflexota | Ktedonobacteria | Ktedonobacteria bacterium brp13 | |||||
| 6724510 | 6724510 | PRJNA1237888_S_NODE_5666_length_174_cov_1.248000_g5616_i0 | PRJNA1237888 | 5666 | 174 | 1.248 | 2.17152 | Ktedonobacterales bacterium | 2306968 | Bacteria | Bacteria | 60.2 | 8.75e-5 | NTclustered | gi|2513924934|gb|CP126532.1| | 2306968 | g5616 | i0 | 75 | 1.70114942528736 | 148 | 28 | 81 | 9 | 16 | 156 | 2775024 | 2775169 | MAG: Ktedonobacterales bacterium isolate bin_006 chromosome, complete genome | blastn | 296 | 60.2 | 1 | Bacteria | Bacillati | Chloroflexota | Ktedonobacteria | Ktedonobacterales | Ktedonobacterales bacterium | ||||
| 13100480 | 13100480 | PRJNA1237888_S_NODE_2691_length_248_cov_2.010050_g2641_i0 | PRJNA1237888 | 2691 | 248 | 2.01005 | 4.984924 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 206 | 1.6299999999999998e-48 | NTclustered | gi|2874254062|emb|OY970386.1| | 1672391 | g2641 | i0 | 82.573 | 230.233870967742 | 241 | 35 | 96 | 6 | 8 | 246 | 1891273 | 1891038 | MAG: uncultured Chloroflexia bacterium isolate MFD03726.bin.c.14 genome assembly, chromosome: 1 | blastn | 57098 | 206 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 13803199 | 13803199 | PRJNA1237888_S_NODE_2371_length_264_cov_1.525581_g2321_i0 | PRJNA1237888 | 2371 | 264 | 1.525581 | 4.02753384 | Chloroflexota | 200795 | Bacteria | Bacteria | 224 | 4.8299999999999996e-54 | NTclustered | gi|2874253698|emb|OY969424.1| | 1672391 | g2321 | i0 | 82.677 | 246.55303030303 | 254 | 42 | 96 | 2 | 7 | 259 | 973123 | 972871 | MAG: uncultured Chloroflexia bacterium isolate MFD06229.bin.c.1 genome assembly, chromosome: 1 | blastn | 65090 | 224 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 15077364 | 15077364 | PRJNA1237888_S_NODE_352_length_632_cov_3.825043_g310_i0 | PRJNA1237888 | 352 | 632 | 3.825043 | 24.17427176 | Caldilinea | 233191 | Bacteria | Bacteria | 183 | 2.13e-41 | NTclustered | gi|470476010|ref|NR_076314.1| | 133453 | g310 | i0 | 89.262 | 405.477848101266 | 149 | 12 | 23 | 3 | 427 | 574 | 1612 | 1757 | Caldilinea aerophila strain STL-6-O1 23S ribosomal RNA gene, complete sequence | blastn | 256262 | 183 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilinea | Caldilinea aerophila | ||
| 15649631 | 15649631 | PRJNA1237888_S_NODE_3553_length_216_cov_1.724551_g3503_i0 | PRJNA1237888 | 3553 | 216 | 1.724551 | 3.72503016 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 171 | 5.04e-38 | NTclustered | gi|2874253698|emb|OY969424.1| | 1672391 | g3503 | i0 | 81.481 | 314.412037037037 | 216 | 32 | 98 | 8 | 4 | 215 | 970446 | 970657 | MAG: uncultured Chloroflexia bacterium isolate MFD06229.bin.c.1 genome assembly, chromosome: 1 | blastn | 67913 | 171 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 18198359 | 18198359 | PRJNA1237888_S_NODE_4495_length_194_cov_1.075862_g4445_i0 | PRJNA1237888 | 4495 | 194 | 1.075862 | 2.08717228 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 119 | 1.63e-22 | NTclustered | gi|2874254102|emb|OY970185.1| | 1672391 | g4445 | i0 | 78.431 | 270.824742268041 | 204 | 29 | 99 | 8 | 1 | 193 | 1858629 | 1858828 | MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 | blastn | 52540 | 119 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 23299091 | 23299091 | PRJNA1237888_S_NODE_4779_length_188_cov_3.956835_g4729_i0 | PRJNA1237888 | 4779 | 188 | 3.956835 | 7.4388498 | Tepidiformaceae bacterium | 3022862 | Bacteria | Bacteria | 158 | 3.32e-34 | NTclustered | gi|2893356066|emb|OZ220489.1| | 3022862 | g4729 | i0 | 87.681 | 122 | 138 | 13 | 73 | 4 | 1 | 137 | 213323 | 213457 | MAG: Tepidiformaceae bacterium isolate fe7a5560-ebd3-4005-b60b-c4614588a40b genome assembly, chromosome: 1 | blastn | 22936 | 158 | 1 | Bacteria | Bacillati | Chloroflexota | Tepidiformia | Tepidiformales | Tepidiformaceae | Tepidiformaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;