RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1237888", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA1237888 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1621290 1621290 PRJNA1237888_S_NODE_4062_length_203_cov_1.519481_g4012_i0 PRJNA1237888 4062 203 1.519481 3.08454643 Ailoscolex lacteospumosus 1046305 Annelida Annelida 337 4.3599999999999994e-88   NTclustered gi|2920003323|emb|OZ238861.1| 1046305 g4012 i0 97 128.566502463054 200 6 99 0 4 203 23326306 23326107 Ailoscolex lacteospumosus genome assembly, chromosome: 2 blastn 26099 337 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
9274867 9274867 PRJNA1237888_S_NODE_2688_length_248_cov_2.623116_g2638_i0 PRJNA1237888 2688 248 2.623116 6.50532768 Aporrectodea caliginosa 302032 Annelida Annelida 453 5.2600000000000005e-123   NTclustered gi|2702707872|gb|PP528189.1| 302032 g2638 i0 100 124.116935483871 245 0 99 0 2 246 13 257 Aporrectodea caliginosa isolate E8 large subunit ribosomal RNA gene, partial sequence blastn 30781 453 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Lumbricidae Aporrectodea Aporrectodea caliginosa
15649666 15649666 PRJNA1237888_S_NODE_7793_length_153_cov_14.528846_g7743_i0 PRJNA1237888 7793 153 14.528846 22.22913438 Ailoscolex lacteospumosus 1046305 Annelida Annelida 54.7 0.003   NTclustered gi|2920003418|emb|OZ238863.1| 1046305 g7743 i0 92.308 1.01960784313725 39 1 24 1 1 37 21935744 21935782 Ailoscolex lacteospumosus genome assembly, chromosome: 4 blastn 156 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
16352251 16352251 PRJNA1237888_S_NODE_3933_length_206_cov_1.961783_g3883_i0 PRJNA1237888 3933 206 1.961783 4.04127298 Lumbricidae 6392 Annelida Annelida 375 9.41e-100   NTclustered gi|11494215|gb|AF212166.1|AF212166 6396 g3883 i0 99.515 133.669902912621 206 1 100 0 1 206 2679 2884 Eisenia fetida 28S ribosomal RNA gene, partial sequence blastn 27536 375 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Lumbricidae Eisenia Eisenia fetida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;