contig_metadata
10 rows where bioproject = "PRJNA1237888", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 346559 | 346559 | PRJNA1237888_S_NODE_6961_length_164_cov_1.165217_g6911_i0 | PRJNA1237888 | 6961 | 164 | 1.165217 | 1.91095588 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 226 | 7.619999999999998e-55 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g6911 | i0 | 91.566 | 380.94512195122 | 166 | 10 | 100 | 4 | 1 | 164 | 172760 | 172597 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 62475 | 226 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 5450145 | 5450145 | PRJNA1237888_S_NODE_5145_length_182_cov_1.172932_g5095_i0 | PRJNA1237888 | 5145 | 182 | 1.172932 | 2.13473624 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 196 | 6.76e-46 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g5095 | i0 | 92.806 | 449.835164835165 | 139 | 4 | 75 | 6 | 2 | 137 | 3044045 | 3043910 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 81870 | 196 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 10550712 | 10550712 | PRJNA1237888_S_NODE_4249_length_199_cov_1.793333_g4199_i0 | PRJNA1237888 | 4249 | 199 | 1.793333 | 3.56873267 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 366 | 5.43e-97 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g4199 | i0 | 100 | 216.025125628141 | 198 | 0 | 99 | 0 | 1 | 198 | 173119 | 173316 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 42989 | 366 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 13100476 | 13100476 | PRJNA1237888_S_NODE_1991_length_290_cov_2.082988_g1941_i0 | PRJNA1237888 | 1991 | 290 | 2.082988 | 6.0406652 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 357 | 5.08e-94 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g1941 | i0 | 91.045 | 78.6379310344828 | 268 | 19 | 91 | 4 | 26 | 290 | 423728 | 423463 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 22805 | 357 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 15649648 | 15649648 | PRJNA1237888_S_NODE_5573_length_175_cov_1.650794_g5523_i0 | PRJNA1237888 | 5573 | 175 | 1.650794 | 2.8888895 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 313 | 6.13e-81 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g5523 | i0 | 98.857 | 138.771428571429 | 175 | 2 | 100 | 0 | 1 | 175 | 173410 | 173584 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 24285 | 313 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 15649669 | 15649669 | PRJNA1237888_S_NODE_993_length_398_cov_3.220630_g943_i0 | PRJNA1237888 | 993 | 398 | 3.22063 | 12.8181074 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 414 | 4.22e-111 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g943 | i0 | 85.644 | 65.7412060301507 | 404 | 47 | 100 | 10 | 1 | 398 | 421262 | 420864 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 26165 | 414 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 18198364 | 18198364 | PRJNA1237888_S_NODE_5615_length_174_cov_4.464000_g5565_i0 | PRJNA1237888 | 5615 | 174 | 4.464 | 7.76736 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 285 | 1.3299999999999998e-72 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g5565 | i0 | 96.512 | 15.3850574712644 | 172 | 6 | 99 | 0 | 1 | 172 | 421844 | 421673 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 2677 | 285 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 19472750 | 19472750 | PRJNA1237888_S_NODE_4216_length_200_cov_1.225166_g4166_i0 | PRJNA1237888 | 4216 | 200 | 1.225166 | 2.450332 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 276 | 9.47e-70 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g4166 | i0 | 93.548 | 13.345 | 186 | 10 | 93 | 2 | 8 | 192 | 3043601 | 3043785 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 2669 | 276 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 24572937 | 24572937 | PRJNA1237888_S_NODE_4340_length_197_cov_3.277027_g4290_i0 | PRJNA1237888 | 4340 | 197 | 3.277027 | 6.45574319 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 315 | 1.9699999999999998e-81 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g4290 | i0 | 95.431 | 18.7868020304569 | 197 | 9 | 100 | 0 | 1 | 197 | 1295027 | 1295223 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 3701 | 315 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 24572963 | 24572963 | PRJNA1237888_S_NODE_7660_length_157_cov_2.870370_g7610_i0 | PRJNA1237888 | 7660 | 157 | 2.87037 | 4.5064809 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 261 | 1.98e-65 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g7610 | i0 | 96.795 | 94.9171974522293 | 156 | 5 | 99 | 0 | 1 | 156 | 172891 | 172736 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 14902 | 261 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;