RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1237347" and tax_phylum = "Phoronida"

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tax_superkingdom 1

tax_phylum 1

  • Phoronida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14368323 14368323 PRJNA1237347_P_NODE_238332_length_386_cov_1.961661_g231759_i0 PRJNA1237347 238332 386 1.961661 7.57201146 Phoronis muelleri 478209 Phoronida other_Eukaryota 85.1 1.62e-18   NR ACD65187.1 478209 g231759 i0 53.6 1.36787564766839 110 51 85.5 0 45 374 1 110 ACD65187.1 putative 60S ribosomal protein RPLP1 [Phoronis muelleri] diamond 528 85.1 1 Eukaryota Opisthokonta Metazoa Phoronida     Phoronidae Phoronis Phoronis muelleri
27452360 27452360 PRJNA1237347_P_NODE_228103_length_397_cov_16.265432_g221531_i0 PRJNA1237347 228103 397 16.265432 64.57376504 Phoronis muelleri 478209 Phoronida other_Eukaryota 80.1 1.69e-16   NR ACD65187.1 478209 g221531 i0 66.7 0.453400503778338 60 20 45.3 0 306 127 1 60 ACD65187.1 putative 60S ribosomal protein RPLP1 [Phoronis muelleri] diamond 180 80.1 1 Eukaryota Opisthokonta Metazoa Phoronida     Phoronidae Phoronis Phoronis muelleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;