RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where bioproject = "PRJNA1237347", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Viruses · 17 ✖

tax_phylum 1

  • Duplornaviricota · 17 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1237347 · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10540606 10540606 PRJNA1237347_P_NODE_11969_length_2296_cov_9.373819_g10338_i0 PRJNA1237347 11969 2296 9.373819 215.22288424 Betacystovirus phi12 3427160 Viruses Viruses 4085 0   NTclustered gi|22855216|ref|NC_004174.1| 161736 g10338 i0 98.78 1 2296 28 100 0 1 2296 1 2296 Pseudomonas phage phi12 segment S, complete sequence blastn 2296 4085 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
13097514 13097514 PRJNA1237347_P_NODE_466971_length_252_cov_4.960894_g460398_i0 PRJNA1237347 466971 252 4.960894 12.50145288 Betacystovirus phi12 3427160 Viruses Viruses 411 3.269999999999999e-110   NTclustered gi|22855221|ref|NC_004175.1| 161736 g460398 i0 96.032 1 252 10 100 0 1 252 2964 3215 Pseudomonas phage phi12 segment M, complete sequence blastn 252 411 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
15648911 15648911 PRJNA1237347_P_NODE_73033_length_833_cov_6.953947_g67137_i0 PRJNA1237347 73033 833 6.953947 57.92637851 Betacystovirus phi12 3427160 Viruses Viruses 1373 0   NTclustered gi|22855221|ref|NC_004175.1| 161736 g67137 i0 96.399 1 833 30 100 0 1 833 4046 3214 Pseudomonas phage phi12 segment M, complete sequence blastn 833 1373 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
20742638 20742638 PRJNA1237347_P_NODE_33177_length_1346_cov_10.311076_g29398_i0 PRJNA1237347 33177 1346 10.311076 138.78708296 Betacystovirus phi12 3427160 Viruses Viruses 2292 0   NTclustered gi|22855221|ref|NC_004175.1| 161736 g29398 i0 97.4 1.02154531946508 1346 35 100 0 1 1346 2972 1627 Pseudomonas phage phi12 segment M, complete sequence blastn 1375 2292 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
23291540 23291540 PRJNA1237347_P_NODE_23239_length_1630_cov_12.861914_g20349_i0 PRJNA1237347 23239 1630 12.861914 209.6491982 Betacystovirus phi12 3427160 Viruses Viruses 2811 0   NTclustered gi|22855221|ref|NC_004175.1| 161736 g20349 i0 97.793 1.00061349693252 1631 35 100 1 1 1630 1631 1 Pseudomonas phage phi12 segment M, complete sequence blastn 1631 2811 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
23298819 23298819 PRJNA1237347_P_NODE_899_length_6745_cov_9.210582_g787_i0 PRJNA1237347 899 6745 9.210582 621.2537559 Betacystovirus phi12 3427160 Viruses Viruses 6408 0   NTclustered gi|22855209|ref|NC_004173.1| 161736 g787 i0 83.842 1.00103780578206 6752 1074 100 15 1 6745 1 6742 Pseudomonas phage phi12 segment L, complete sequence blastn 6752 6408 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
26852132 26852132 PRJNA1237347_P_NODE_70481_length_852_cov_3.671374_g64673_i0 PRJNA1237347 70481 852 3.671374 31.28010648 Qianjiang toti-like virus 1 3348831 Viruses Viruses 58.9 1.12e-5   NR XHA85765.1 3348832 g64673 i0 24.5 1.03521126760563 294 190 98.6 12 7 846 572 847 XHA85765.1 MAG: putative RNA-dependent RNA polymerase [Qianjiang toti-like virus 10] diamond 882 58.9 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Qianjiang toti-like virus 10
27167785 27167785 PRJNA1237347_P_NODE_399662_length_280_cov_1.077295_g393089_i0 PRJNA1237347 399662 280 1.077295 3.016426 Tuatara cloaca-associated totivirus-2 2970569 Viruses Viruses 108 5.6999999999999995e-25   NR UUV42635.1 2970569 g393089 i0 46.7 0.985714285714286 92 49 98.6 0 278 3 559 650 UUV42635.1 MAG: RNA-dependent RNA polymerase [Tuatara cloaca-associated totivirus-2] diamond 276 108 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Tuatara cloaca-associated totivirus-2
27313121 27313121 PRJNA1237347_P_NODE_58323_length_960_cov_3.299887_g52946_i0 PRJNA1237347 58323 960 3.299887 31.6789152 Viruses 10239 Viruses Viruses 157 7.54e-39   NR WZH58279.1 3129403 g52946 i0 32.5 2.940625 308 195 93.8 6 900 1 258 560 WZH58279.1 MAG: RNA-dependent RNA polymerase [Chrocuvert virus] diamond 2823 157 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Chrocuvert virus
27344704 27344704 PRJNA1237347_P_NODE_450943_length_259_cov_1.236559_g444370_i0 PRJNA1237347 450943 259 1.236559 3.20268781 Viruses 10239 Viruses Viruses 56.6 5.74e-7   NR DAZ87251.1 2912705 g444370 i0 35.1 1.83011583011583 77 40 82.2 2 45 257 156 228 DAZ87251.1 TPA_asm: RNA-dependent polymerase, partial [Laestrygon toti-like virus] diamond 474 56.6 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Laestrygon toti-like virus
27818260 27818260 PRJNA1237347_P_NODE_203064_length_429_cov_1.884831_g196492_i0 PRJNA1237347 203064 429 1.884831 8.08592499 Viruses 10239 Viruses Viruses 128 1.05e-31   NR WAK73612.1 2976315 g196492 i0 44 1.98601398601399 141 78 98.6 1 5 427 146 285 WAK73612.1 RNA-dependent RNA polymerase [Phytophthora palustris toti-like virus 4] diamond 852 129 0.992248062015504 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Phytophthora palustris toti-like virus 4
28684190 28684190 PRJNA1237347_P_NODE_687_length_7392_cov_15.509769_g602_i0 PRJNA1237347 687 7392 15.509769 1146.48212448 Sichuan farmland cysto-like virus 2824592 Viruses Viruses 396 1.7599999999999995e-116   NR QYF49781.1 2824592 g602 i0 34.6 0.248376623376623 612 373 24.6 8 5584 3767 11 601 QYF49781.1 MAG: putative RNA-dependent RNA polymerase [Sichuan farmland cysto-like virus] diamond 1836 396 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Sichuan farmland cysto-like virus
28936046 28936046 PRJNA1237347_P_NODE_106668_length_654_cov_1.987952_g100223_i0 PRJNA1237347 106668 654 1.987952 13.00120608 Totiviridae sp. 1955172 Viruses Viruses 51.6 0.00116   NR WAK77275.1 1955172 g100223 i0 28.8 3.02752293577982 132 86 57.3 4 265 639 105 235 WAK77275.1 MAG: RNA-dependent RNA polymerase [Totiviridae sp.] diamond 1980 51.6 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
30862619 30862619 PRJNA1237347_P_NODE_109494_length_643_cov_1.689474_g103032_i0 PRJNA1237347 109494 643 1.689474 10.86331782 Qianjiang toti-like virus 8 3348857 Viruses Viruses 55.8 3.98e-5   NR XHA85760.1 3348857 g103032 i0 30.1 0.867807153965785 93 64 42.9 1 367 642 424 516 XHA85760.1 MAG: putative RNA-dependent RNA polymerase [Qianjiang toti-like virus 8] diamond 558 55.8 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Qianjiang toti-like virus 8
32318212 32318212 PRJNA1237347_P_NODE_465439_length_253_cov_1.705556_g458866_i0 PRJNA1237347 465439 253 1.705556 4.31505668 Planotaenium ohtanii toti-like virus 2933122 Viruses Viruses 65.1 5.82e-10   NR CAI5383898.1 2933122 g458866 i0 48.8 0.972332015810277 82 37 93.7 3 246 10 766 845 CAI5383898.1 RNA-dependent RNA polymerase [Planotaenium ohtanii toti-like virus] diamond 246 65.1 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Planotaenium ohtanii toti-like virus
32602331 32602331 PRJNA1237347_P_NODE_332560_length_313_cov_1.458333_g325987_i0 PRJNA1237347 332560 313 1.458333 4.56458229 Cronartium ribicola totivirus 1 2687247 Viruses Viruses 79 1.61e-14   NR QGX74227.1 2687247 g325987 i0 40 0.910543130990415 95 57 91.1 0 9 293 61 155 QGX74227.1 putative capsid protein [Cronartium ribicola totivirus 1] diamond 285 79 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Cronartium ribicola totivirus 1
32872542 32872542 PRJNA1237347_P_NODE_284720_length_345_cov_1.415441_g278147_i0 PRJNA1237347 284720 345 1.415441 4.88327145 Viruses 10239 Viruses Viruses 82.8 1.03e-15   NR WAK73612.1 2976315 g278147 i0 38.3 2 115 70 100 1 345 1 36 149 WAK73612.1 RNA-dependent RNA polymerase [Phytophthora palustris toti-like virus 4] diamond 690 82.8 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Phytophthora palustris toti-like virus 4

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;