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contig_metadata

32 rows where bioproject = "PRJNA1237347" and tax_phylum = "Chlorobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorobiota · 32 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
343368 343368 PRJNA1237347_P_NODE_452001_length_258_cov_1.908108_g445428_i0 PRJNA1237347 452001 258 1.908108 4.92291864 Chlorobiota bacterium 2268192 Bacteria Bacteria 84.3 1.47e-19   NR MDB5035547.1 2268192 g445428 i0 80.4 1.77906976744186 51 10 59.3 0 191 39 1 51 MDB5035547.1 ribosomal protein [Chlorobiota bacterium] diamond 459 84.3 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
4165842 4165842 PRJNA1237347_P_NODE_214164_length_414_cov_2.703812_g207592_i0 PRJNA1237347 214164 414 2.703812 11.19378168 Chlorobiales bacterium 2723030 Bacteria Bacteria 165 8.13e-45   NR MBC8044519.1 2723030 g207592 i0 62.5 1.69565217391304 120 39 82.6 1 72 413 1 120 MBC8044519.1 asparagine synthase (glutamine-hydrolyzing) [Chlorobiales bacterium] diamond 702 165 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales     Chlorobiales bacterium
9269662 9269662 PRJNA1237347_P_NODE_35188_length_1301_cov_3.298046_g31288_i0 PRJNA1237347 35188 1301 3.298046 42.90757846 Chlorobium phaeobacteroides 1096 Bacteria Bacteria 178 2.1e-39   NTclustered gi|470483367|ref|NR_076588.1| 1096 g31288 i0 83.333 20.185242121445 192 32 15 0 168 359 2646 2455 Chlorobium phaeobacteroides strain BS1 23S ribosomal RNA gene, complete sequence blastn 26261 178 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae Chlorobium Chlorobium phaeobacteroides
13093597 13093597 PRJNA1237347_P_NODE_26811_length_1515_cov_3.634535_g23580_i0 PRJNA1237347 26811 1515 3.634535 55.06320525 Chloroherpetonaceae bacterium 2969135 Bacteria Bacteria 499 2.299999999999999e-169   NR MFQ3598892.1 2969135 g23580 i0 53.6 1.8 496 210 95.4 8 25 1470 59 548 MFQ3598892.1 DNA/RNA non-specific endonuclease [Chloroherpetonaceae bacterium] diamond 2727 499 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chloroherpetonaceae   Chloroherpetonaceae bacterium
26933385 26933385 PRJNA1237347_P_NODE_295822_length_337_cov_1.166667_g289249_i0 PRJNA1237347 295822 337 1.166667 3.93166779 Pseudomonadati 3379134 Bacteria Bacteria 115 5.230000000000001e-29   NR WP_211204021.1 100716 g289249 i0 49.5 9.72106824925816 109 55 97 0 328 2 141 249 WP_211204021.1 DNA/RNA non-specific endonuclease [Chloroherpeton thalassium] diamond 3276 115 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chloroherpetonaceae Chloroherpeton Chloroherpeton thalassium
27294161 27294161 PRJNA1237347_P_NODE_198843_length_435_cov_1.980663_g192271_i0 PRJNA1237347 198843 435 1.980663 8.61588405 Chlorobiota bacterium 2268192 Bacteria Bacteria 191 6.479999999999999e-55   NR MCI0449509.1 2268192 g192271 i0 57.2 4.99310344827586 145 61 100 1 435 1 421 564 MCI0449509.1 phosphoenolpyruvate carboxykinase (GTP) [Chlorobiota bacterium] diamond 2172 191 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
27641839 27641839 PRJNA1237347_P_NODE_232024_length_393_cov_1.862500_g225452_i0 PRJNA1237347 232024 393 1.8625 7.319625 Chlorobiota bacterium 2268192 Bacteria Bacteria 77 7.76e-14   NR NPA37806.1 2268192 g225452 i0 49.4 0.648854961832061 85 34 64.1 3 254 3 33 109 NPA37806.1 hypothetical protein [Chlorobiota bacterium] diamond 255 77 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
27862482 27862482 PRJNA1237347_P_NODE_203585_length_428_cov_2.845070_g197013_i0 PRJNA1237347 203585 428 2.84507 12.1768996 Chlorobiota bacterium 2268192 Bacteria Bacteria 123 2.77e-32   NR GDX65613.1 2268192 g197013 i0 70.5 1.14953271028037 78 22 54 1 198 428 9 86 GDX65613.1 hypothetical protein LBMAG36_06790 [Chlorobiota bacterium] diamond 492 123 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
27894203 27894203 PRJNA1237347_P_NODE_289985_length_341_cov_1.604478_g283412_i0 PRJNA1237347 289985 341 1.604478 5.47126998 Chlorobiales bacterium 2723030 Bacteria Bacteria 76.6 1.75e-14   NR NTW49796.1 2723030 g283412 i0 38.7 1.95307917888563 111 63 97.7 2 5 337 50 155 NTW49796.1 class I SAM-dependent methyltransferase [Chlorobiales bacterium] diamond 666 76.6 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales     Chlorobiales bacterium
28462606 28462606 PRJNA1237347_P_NODE_114046_length_626_cov_6.589512_g107561_i0 PRJNA1237347 114046 626 6.589512 41.25034512 Chlorobiaceae bacterium 2067991 Bacteria Bacteria 76.6 2.46e-13   NR MEI8033547.1 2067991 g107561 i0 39.8 1.61501597444089 123 66 56.1 3 353 3 77 197 MEI8033547.1 outer membrane beta-barrel protein [Chlorobiaceae bacterium] diamond 1011 76.6 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae   Chlorobiaceae bacterium
28639249 28639249 PRJNA1237347_P_NODE_419367_length_271_cov_3.585859_g412794_i0 PRJNA1237347 419367 271 3.585859 9.71767789 Pseudomonadati 3379134 Bacteria Bacteria 127 1.2099999999999999e-31   NR MEI7696400.1 1095 g412794 i0 64 1.97047970479705 89 32 98.5 0 271 5 457 545 MEI7696400.1 type ISP restriction/modification enzyme [Chlorobium sp.] diamond 534 127 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae Chlorobium Chlorobium sp.
28841628 28841628 PRJNA1237347_P_NODE_492668_length_249_cov_0.863636_g486095_i0 PRJNA1237347 492668 249 0.863636 2.15045364 Chlorobi bacterium NICIL-2 1662223 Bacteria Bacteria 106 2.56e-26   NR KXB98505.1 1662223 g486095 i0 100 0.626506024096386 52 0 62.7 0 2 157 171 222 KXB98505.1 MAG: hypothetical protein AA908_03750 [Chlorobi bacterium NICIL-2] diamond 156 106 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobi bacterium NICIL-2
28904547 28904547 PRJNA1237347_P_NODE_388148_length_285_cov_1.051887_g381575_i0 PRJNA1237347 388148 285 1.051887 2.99787795 Chloroherpetonaceae bacterium 2969135 Bacteria Bacteria 61.6 1.44e-8   NR MDX2127778.1 2969135 g381575 i0 40.7 1.24210526315789 118 39 91.6 5 265 5 379 496 MDX2127778.1 T9SS type A sorting domain-containing protein [Chloroherpetonaceae bacterium] diamond 354 61.6 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chloroherpetonaceae   Chloroherpetonaceae bacterium
29126170 29126170 PRJNA1237347_P_NODE_460109_length_255_cov_1.692308_g453536_i0 PRJNA1237347 460109 255 1.692308 4.3153854 Chlorobiota bacterium 2268192 Bacteria Bacteria 116 3.77e-29   NR NPA35698.1 2268192 g453536 i0 57.6 1 85 36 100 0 255 1 170 254 NPA35698.1 PQQ-binding-like beta-propeller repeat protein [Chlorobiota bacterium] diamond 255 116 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
29220867 29220867 PRJNA1237347_P_NODE_530709_length_244_cov_0.900585_g524136_i0 PRJNA1237347 530709 244 0.900585 2.1974274 Chlorobium phaeovibrioides 1094 Bacteria Bacteria 102 1.42e-23   NR WP_149997975.1 1094 g524136 i0 63.8 1.95491803278689 80 29 98.4 0 240 1 46 125 WP_149997975.1 UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [Chlorobium phaeovibrioides] diamond 477 102 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae Chlorobium Chlorobium phaeovibrioides
29346920 29346920 PRJNA1237347_P_NODE_388789_length_284_cov_2.137441_g382216_i0 PRJNA1237347 388789 284 2.137441 6.07033244 Chloroherpetonaceae bacterium 2969135 Bacteria Bacteria 123 7.099999999999999e-32   NR MCS6988696.1 2969135 g382216 i0 73.5 1.43661971830986 68 18 71.8 0 205 2 1 68 MCS6988696.1 site-specific DNA-methyltransferase [Chloroherpetonaceae bacterium] diamond 408 123 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chloroherpetonaceae   Chloroherpetonaceae bacterium
29347094 29347094 PRJNA1237347_P_NODE_520149_length_245_cov_0.895349_g513576_i0 PRJNA1237347 520149 245 0.895349 2.19360505 Chlorobiota bacterium 2268192 Bacteria Bacteria 128 1.29e-34   NR NPA68831.1 2268192 g513576 i0 72.5 3.08571428571429 80 21 98 1 3 242 48 126 NPA68831.1 type I methionyl aminopeptidase [Chlorobiota bacterium] diamond 756 128 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
29396802 29396802 PRJNA1237347_P_NODE_309369_length_328_cov_0.729412_g302796_i0 PRJNA1237347 309369 328 0.729412 2.39247136 Pseudomonadati 3379134 Bacteria Bacteria 123 3.28e-31   NR GDX65646.1 2268192 g302796 i0 58.3 4.3719512195122 96 39 86.9 1 40 324 27 122 GDX65646.1 hypothetical protein LBMAG36_07120 [Chlorobiota bacterium] diamond 1434 123 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
29410032 29410032 PRJNA1237347_P_NODE_509969_length_246_cov_1.699422_g503396_i0 PRJNA1237347 509969 246 1.699422 4.18057812 Chlorobiota bacterium 2268192 Bacteria Bacteria 124 7.43e-34   NR NOX46167.1 2268192 g503396 i0 74.4 1.90243902439024 78 19 95.1 1 245 12 74 150 NOX46167.1 Uma2 family endonuclease [Chlorobiota bacterium] diamond 468 124 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
29693533 29693533 PRJNA1237347_P_NODE_199790_length_434_cov_1.279778_g193218_i0 PRJNA1237347 199790 434 1.279778 5.55423652 Chlorobiota bacterium 2268192 Bacteria Bacteria 52.4 1.26e-4   NR NOZ35671.1 2268192 g193218 i0 28 0.642857142857143 93 67 64.3 0 297 19 569 661 NOZ35671.1 SpoIIE family protein phosphatase [Chlorobiota bacterium] diamond 279 52.4 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
29946566 29946566 PRJNA1237347_P_NODE_166131_length_490_cov_1.846523_g159566_i0 PRJNA1237347 166131 490 1.846523 9.0479627 [Candidatus Thermochlorobacteriaceae] bacterium GBChlB 1519464 Bacteria Bacteria 265 3.54e-86   NR KER10389.1 1519464 g159566 i0 77.2 0.991836734693878 162 36 99.2 1 487 2 119 279 KER10389.1 MAG: hypothetical protein HY22_05890 [[Candidatus Thermochlorobacteriaceae] bacterium GBChlB] diamond 486 265 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chloroherpetonaceae   [Candidatus Thermochlorobacteriaceae] bacterium GBChlB
30104675 30104675 PRJNA1237347_P_NODE_402092_length_279_cov_1.043689_g395519_i0 PRJNA1237347 402092 279 1.043689 2.91189231 [Chlorobium] sp. 445 2033588 Bacteria Bacteria 43.1 0.0414   NR PIO49251.1 2033588 g395519 i0 34.6 0.838709677419355 78 46 81.7 2 47 274 277 351 PIO49251.1 MAG: oxidoreductase [[Chlorobium] sp. 445] diamond 234 43.1 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chloroherpetonaceae   [Chlorobium] sp. 445
30767922 30767922 PRJNA1237347_P_NODE_113434_length_629_cov_1.347122_g106952_i0 PRJNA1237347 113434 629 1.347122 8.47339738 Chloroherpetonaceae bacterium 2969135 Bacteria Bacteria 326 4.06e-111   NR MFQ3598463.1 2969135 g106952 i0 74.5 0.934817170111288 196 50 93.5 0 42 629 1 196 MFQ3598463.1 hypothetical protein [Chloroherpetonaceae bacterium] diamond 588 326 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chloroherpetonaceae   Chloroherpetonaceae bacterium
30944769 30944769 PRJNA1237347_P_NODE_314134_length_324_cov_2.557769_g307561_i0 PRJNA1237347 314134 324 2.557769 8.28717156 Pseudomonadati 3379134 Bacteria Bacteria 45.8 0.00734   NR KER11130.1 1519464 g307561 i0 48.6 0.666666666666667 37 19 34.3 0 322 212 195 231 KER11130.1 MAG: hypothetical protein HY22_00185 [[Candidatus Thermochlorobacteriaceae] bacterium GBChlB] diamond 216 46.2 0.991341991341991 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chloroherpetonaceae   [Candidatus Thermochlorobacteriaceae] bacterium GBChlB
31526834 31526834 PRJNA1237347_P_NODE_273776_length_354_cov_1.035587_g267203_i0 PRJNA1237347 273776 354 1.035587 3.66597798 Chlorobiota bacterium 2268192 Bacteria Bacteria 94 4.39e-21   NR NOZ46096.1 2268192 g267203 i0 42.2 0.983050847457627 116 64 95.8 1 341 3 1 116 NOZ46096.1 hypothetical protein [Chlorobiota bacterium] diamond 348 94 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
31716871 31716871 PRJNA1237347_P_NODE_557217_length_241_cov_0.916667_g550644_i0 PRJNA1237347 557217 241 0.916667 2.20916747 Chlorobi bacterium NICIL-2 1662223 Bacteria Bacteria 163 9.14e-46   NR KXB97465.1 1662223 g550644 i0 100 0.983402489626556 79 0 98.3 0 4 240 342 420 KXB97465.1 MAG: hypothetical protein AA908_06295 [Chlorobi bacterium NICIL-2] diamond 237 163 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobi bacterium NICIL-2
31748047 31748047 PRJNA1237347_P_NODE_279897_length_349_cov_1.018116_g273324_i0 PRJNA1237347 279897 349 1.018116 3.55322484 Chlorobiota bacterium 2268192 Bacteria Bacteria 84.3 7.04e-17   NR MCI0716066.1 2268192 g273324 i0 40.2 1.0487106017192 122 63 99.7 3 2 349 86 203 MCI0716066.1 hypothetical protein [Chlorobiota bacterium] diamond 366 84.3 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
31811809 31811809 PRJNA1237347_P_NODE_66457_length_884_cov_11.494451_g60764_i0 PRJNA1237347 66457 884 11.494451 101.61094684 Chlorobiota bacterium 2268192 Bacteria Bacteria 68.9 2.16e-9   NR NOZ45690.1 2268192 g60764 i0 30 0.994343891402715 293 178 93.7 12 36 863 1 283 NOZ45690.1 hypothetical protein [Chlorobiota bacterium] diamond 879 68.9 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
31937987 31937987 PRJNA1237347_P_NODE_415597_length_273_cov_1.520000_g409024_i0 PRJNA1237347 415597 273 1.52 4.1496 Chlorobium sp. 1095 Bacteria Bacteria 65.5 5.32e-10   NR MBV5303186.1 1095 g409024 i0 40.7 0.89010989010989 81 47 87.9 1 264 25 264 344 MBV5303186.1 hypothetical protein [Chlorobium sp.] diamond 243 65.5 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae Chlorobium Chlorobium sp.
32128156 32128156 PRJNA1237347_P_NODE_398798_length_280_cov_1.458937_g392225_i0 PRJNA1237347 398798 280 1.458937 4.0850236 Chlorobi bacterium NICIL-2 1662223 Bacteria Bacteria 140 2.75e-40   NR KXB97136.1 1662223 g392225 i0 98.5 0.728571428571429 68 1 72.9 0 1 204 83 150 KXB97136.1 MAG: hypothetical protein AA908_08240 [Chlorobi bacterium NICIL-2] diamond 204 140 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobi bacterium NICIL-2
32146494 32146494 PRJNA1237347_P_NODE_59978_length_943_cov_16.024138_g54523_i0 PRJNA1237347 59978 943 16.024138 151.10762134 Bacteria 2 Bacteria Bacteria 310 2.05e-102   NR PIO47577.1 2033588 g54523 i0 60.8 11.6977730646872 240 94 76.4 0 903 184 4 243 PIO47577.1 MAG: methyltransferase [[Chlorobium] sp. 445] diamond 11031 311 0.996784565916399 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chloroherpetonaceae   [Chlorobium] sp. 445
32254979 32254979 PRJNA1237347_P_NODE_484658_length_250_cov_0.870056_g478085_i0 PRJNA1237347 484658 250 0.870056 2.17514 Chlorobi bacterium NICIL-2 1662223 Bacteria Bacteria 168 5.06e-51   NR KXB97851.1 1662223 g478085 i0 97.6 0.996 83 2 99.6 0 249 1 33 115 KXB97851.1 MAG: hypothetical protein AA908_00030 [Chlorobi bacterium NICIL-2] diamond 249 168 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobi bacterium NICIL-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;