RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Fervidibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Fervidibacterota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30452223 30452223 PRJNA1237347_P_NODE_147433_length_530_cov_1.487965_g140884_i0 PRJNA1237347 147433 530 1.487965 7.8862145 Candidatus Fervidibacter sp. 3100871 Bacteria Bacteria 55.5 2.46e-5   NR MFA0736097.1 3100871 g140884 i0 40.5 1.99811320754717 79 44 43 2 521 294 181 259 MFA0736097.1 hypothetical protein [Candidatus Fervidibacter sp.] diamond 1059 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter sp.
32318154 32318154 PRJNA1237347_P_NODE_421839_length_270_cov_4.817259_g415266_i0 PRJNA1237347 421839 270 4.817259 13.0065993 Candidatus Fervidibacter sacchari 1448929 Bacteria Bacteria 44.3 0.0131   NR WP_259093961.1 1448929 g415266 i0 35.2 0.788888888888889 71 38 78.9 2 260 48 198 260 WP_259093961.1 phytanoyl-CoA dioxygenase family protein [Candidatus Fervidibacter sacchari] diamond 213 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter sacchari

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;