RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Colwelliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Colwelliibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7427386 7427386 PRJNA1237347_P_NODE_54206_length_1005_cov_8.756438_g49012_i0 PRJNA1237347 54206 1005 8.756438 88.0022019 Candidatus Colwellbacteria bacterium 2750074 Bacteria Bacteria 179 3.82e-52   NR MDD4931421.1 2750074 g49012 i0 68.8 0.880597014925373 125 35 37.3 1 310 684 33 153 MDD4931421.1 hypothetical protein [Candidatus Colwellbacteria bacterium] diamond 885 179 1 Bacteria Bacteria candidate phyla   Candidatus Colwelliibacteriota         Candidatus Colwellbacteria bacterium
21449329 21449329 PRJNA1237347_P_NODE_160857_length_500_cov_3.021077_g154296_i0 PRJNA1237347 160857 500 3.021077 15.105385 Candidatus Colwellbacteria bacterium 2750074 Bacteria Bacteria 242 7.71e-74   NR MDD4930912.1 2750074 g154296 i0 75.8 5.292 149 36 89.4 0 449 3 1 149 MDD4930912.1 molecular chaperone DnaK [Candidatus Colwellbacteria bacterium] diamond 2646 242 1 Bacteria Bacteria candidate phyla   Candidatus Colwelliibacteriota         Candidatus Colwellbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;