RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Collieribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Collieribacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28652113 28652113 PRJNA1237347_P_NODE_326047_length_317_cov_1.262295_g319474_i0 PRJNA1237347 326047 317 1.262295 4.00147515 Candidatus Collierbacteria bacterium RIFOXYD1_FULL_4 2053540 Bacteria Bacteria 43.5 0.0461   NR OGD84054.1 1817731 g319474 i0 34.3 0.634069400630915 67 44 63.4 0 240 40 106 172 OGD84054.1 MAG: hypothetical protein A2572_04005 [Candidatus Collierbacteria bacterium RIFOXYD1_FULL_40_9] diamond 201 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Collieribacteriota         Candidatus Collierbacteria bacterium RIFOXYD1_FULL_40_9
31146929 31146929 PRJNA1237347_P_NODE_360975_length_297_cov_1.910714_g354402_i0 PRJNA1237347 360975 297 1.910714 5.67482058 Candidatus Collierbacteria bacterium GW2 2053540 Bacteria Bacteria 57.4 5.01e-7   NR KKS42588.1 1618378 g354402 i0 49.3 0.676767676767677 67 31 64.6 2 269 78 446 512 KKS42588.1 MAG: hypothetical protein UV06_C0009G0003 [Candidatus Collierbacteria bacterium GW2011_GWA2_42_17] diamond 201 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Collieribacteriota         Candidatus Collierbacteria bacterium GW2011_GWA2_42_17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;