RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Auribacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Auribacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26598015 26598015 PRJNA1237347_P_NODE_387081_length_285_cov_1.452830_g380508_i0 PRJNA1237347 387081 285 1.45283 4.1405655 Candidatus Auribacterota bacterium 2093365 Bacteria Bacteria 73.6 8.51e-15   NR MCX6356220.1 2093365 g380508 i0 80.5 3.2 77 14 80 1 3 230 7 83 MCX6356220.1 GlsB/YeaQ/YmgE family stress response membrane protein [Candidatus Auribacterota bacterium] diamond 912 73.6 1 Bacteria PVC group Pseudomonadati Candidatus Auribacterota         Candidatus Auribacterota bacterium
28904514 28904514 PRJNA1237347_P_NODE_363228_length_296_cov_1.632287_g356655_i0 PRJNA1237347 363228 296 1.632287 4.83156952 Candidatus Auribacterota bacterium 2093365 Bacteria Bacteria 43.9 0.0272   NR MCX6355713.1 2093365 g356655 i0 36.5 0.75 74 35 64.9 2 32 223 31 102 MCX6355713.1 glycosyltransferase family 39 protein [Candidatus Auribacterota bacterium] diamond 222 43.9 1 Bacteria PVC group Pseudomonadati Candidatus Auribacterota         Candidatus Auribacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;