RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1237347", tax_kingdom = "Promethearchaeati" and tax_phylum = "Candidatus Thorarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Thorarchaeota · 2 ✖

tax_kingdom 1

  • Promethearchaeati · 2 ✖

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7425229 7425229 PRJNA1237347_P_NODE_123486_length_594_cov_18.261036_g116969_i0 PRJNA1237347 123486 594 18.261036 108.47055384 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 211 3.83e-66   NR MBS3794891.1 2053491 g116969 i0 59.4 16.8686868686869 170 64 85.9 2 518 9 1 165 MBS3794891.1 peptide-methionine (S)-S-oxide reductase MsrA [Candidatus Thorarchaeota archaeon] diamond 10020 211 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
30041370 30041370 PRJNA1237347_P_NODE_282231_length_347_cov_1.302920_g275658_i0 PRJNA1237347 282231 347 1.30292 4.5211324 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 75.5 3.54e-13   NR TFG26036.1 2053491 g275658 i0 36.4 3.71757925072046 118 66 95.1 3 17 346 24 140 TFG26036.1 MAG: class C beta-lactamase-related serine hydrolase [Candidatus Thorarchaeota archaeon] diamond 1290 75.5 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;