RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA1237347", tax_kingdom = "Nanobdellati" and tax_phylum = "Nanobdellota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 9 ✖

tax_kingdom 1

  • Nanobdellati · 9 ✖

bioproject 1

  • PRJNA1237347 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27407868 27407868 PRJNA1237347_P_NODE_331903_length_313_cov_2.745833_g325330_i0 PRJNA1237347 331903 313 2.745833 8.59445729 root 1 Root_unresolved Root_unresolved 122 5.489999999999999e-31   NR MDE1848693.1 2026764 g325330 i0 58 4.77316293929712 100 42 95.8 0 313 14 153 252 MDE1848693.1 cysteine desulfurase [Nanoarchaeota archaeon] diamond 1494 122 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28683963 28683963 PRJNA1237347_P_NODE_393827_length_282_cov_1.473684_g387254_i0 PRJNA1237347 393827 282 1.473684 4.15578888 Nanobdellota archaeon 2026764 Archaea Archaea 45.1 0.00913   NR MFC1801664.1 2026764 g387254 i0 41.2 0.723404255319149 68 31 62.8 3 61 237 356 423 MFC1801664.1 metallophosphoesterase [Nanoarchaeota archaeon] diamond 204 45.1 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28809590 28809590 PRJNA1237347_P_NODE_309128_length_328_cov_1.145098_g302555_i0 PRJNA1237347 309128 328 1.145098 3.75592144 Nanobdellota archaeon 2026764 Archaea Archaea 76.3 1.73e-13   NR MBU2639138.1 2026764 g302555 i0 53.1 0.585365853658537 64 30 58.5 0 5 196 260 323 MBU2639138.1 hypothetical protein [Nanoarchaeota archaeon] diamond 192 76.3 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29820284 29820284 PRJNA1237347_P_NODE_445031_length_261_cov_1.595745_g438458_i0 PRJNA1237347 445031 261 1.595745 4.16489445 Nanobdellota archaeon 2026764 Archaea Archaea 45.8 0.00337   NR MFC1690596.1 2026764 g438458 i0 35.7 1.54022988505747 70 41 80.5 2 13 222 12 77 MFC1690596.1 exosome complex protein Rrp42 [Nanoarchaeota archaeon] diamond 402 45.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
30609845 30609845 PRJNA1237347_P_NODE_188513_length_451_cov_1.293651_g181941_i0 PRJNA1237347 188513 451 1.293651 5.83436601 Nanopusillaceae archaeon 3058032 Archaea Archaea 107 8.85e-24   NR MEM1684651.1 3058032 g181941 i0 44.1 0.784922394678492 118 66 78.5 0 3 356 578 695 MEM1684651.1 phage/plasmid primase, P4 family [Nanopusillaceae archaeon] diamond 354 107 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia Nanoarchaeales Nanopusillaceae   Nanopusillaceae archaeon
32033101 32033101 PRJNA1237347_P_NODE_420458_length_271_cov_1.555556_g413885_i0 PRJNA1237347 420458 271 1.555556 4.21555676 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 73.6 7.72e-13   NR HJZ18565.1 2910166 g413885 i0 52.2 0.74169741697417 67 32 74.2 0 258 58 383 449 HJZ18565.1 beta-propeller fold lactonase family protein [Candidatus Nanoarchaeia archaeon] diamond 201 73.6 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
32064871 32064871 PRJNA1237347_P_NODE_97678_length_691_cov_827.786408_g91320_i0 PRJNA1237347 97678 691 827.786408 5720.00407928 Nanobdellota archaeon 2026764 Archaea Archaea 126 1.25e-33   NR MCA9460427.1 2026764 g91320 i0 86.1 0.342981186685962 79 11 34.3 0 361 125 2 80 MCA9460427.1 hypothetical protein [Nanoarchaeota archaeon] diamond 237 126 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32381129 32381129 PRJNA1237347_P_NODE_364639_length_295_cov_2.427928_g358066_i0 PRJNA1237347 364639 295 2.427928 7.1623876 Nanobdellota archaeon 2026764 Archaea Archaea 77.4 1.99e-14   NR MFC1697278.1 2026764 g358066 i0 54.2 0.732203389830508 72 31 71.2 1 84 293 103 174 MFC1697278.1 DUF1152 domain-containing protein [Nanoarchaeota archaeon] diamond 216 77.4 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32571098 32571098 PRJNA1237347_P_NODE_33819_length_1331_cov_2.710652_g30010_i0 PRJNA1237347 33819 1331 2.710652 36.07877812 Nanobdellota archaeon 2026764 Archaea Archaea 111 5.08e-22   NR MEK6761049.1 2026764 g30010 i0 24.3 0.797896318557476 354 220 78.4 11 1217 174 23 334 MEK6761049.1 aminopeptidase N [Nanoarchaeota archaeon] diamond 1062 111 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;