RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1237347", tax_clade = "SAR202 cluster" and tax_kingdom = "Bacillati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bacillati · 3 ✖

tax_clade 1

  • SAR202 cluster · 3 ✖

bioproject 1

  • PRJNA1237347 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16922647 16922647 PRJNA1237347_P_NODE_563114_length_232_cov_2.490566_g556540_i0 PRJNA1237347 563114 232 2.490566 5.77811312 SAR202 cluster bacterium 2030829 Bacteria Bacteria 109 6.02e-26   NR MCX8213030.1 2030829 g556540 i0 71.4 1.99137931034483 77 22 99.6 0 232 2 194 270 MCX8213030.1 hypothetical protein [SAR202 cluster bacterium] diamond 462 109 1 Bacteria SAR202 cluster Bacillati Chloroflexota Dehalococcoidia       SAR202 cluster bacterium
27167600 27167600 PRJNA1237347_P_NODE_248842_length_376_cov_0.933993_g242269_i0 PRJNA1237347 248842 376 0.933993 3.51181368 SAR202 cluster bacterium 2030829 Bacteria Bacteria 67.4 2.25e-10   NR MQG06286.1 2030829 g242269 i0 34.6 0.853723404255319 107 51 85.4 2 52 372 167 254 MQG06286.1 DUF1295 domain-containing protein [SAR202 cluster bacterium] diamond 321 67.4 1 Bacteria SAR202 cluster Bacillati Chloroflexota Dehalococcoidia       SAR202 cluster bacterium
28354835 28354835 PRJNA1237347_P_NODE_475986_length_251_cov_0.865169_g469413_i0 PRJNA1237347 475986 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 77 3.53e-14   NR MDP6514978.1 2030829 g469413 i0 45 2.86852589641434 80 44 95.6 0 10 249 235 314 MDP6514978.1 adenylate/guanylate cyclase domain-containing protein [SAR202 cluster bacterium] diamond 720 77.4 0.994832041343669 Bacteria SAR202 cluster Bacillati Chloroflexota Dehalococcoidia       SAR202 cluster bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;