RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1237347", tax_clade = "Pithoviruses" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 7 ✖

tax_clade 1

  • Pithoviruses · 7 ✖

bioproject 1

  • PRJNA1237347 · 7 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28431085 28431085 PRJNA1237347_P_NODE_245246_length_379_cov_1.679739_g238673_i0 PRJNA1237347 245246 379 1.679739 6.36621081 Solumvirus sp. 2487773 Viruses Viruses 70.1 4.13e-11   NR AYV86402.1 2487773 g238673 i0 31.5 0.981530343007916 124 85 98.2 0 4 375 172 295 AYV86402.1 MAG: hypothetical protein Solumvirus9_2 [Solumvirus sp.] diamond 372 70.1 1 Viruses Pithoviruses             Solumvirus sp.
28904414 28904414 PRJNA1237347_P_NODE_272668_length_355_cov_0.861702_g266095_i0 PRJNA1237347 272668 355 0.861702 3.0590421 Cedratvirus Ce2-1 3068400 Viruses Viruses 55.5 4.79e-6   NR GMQ13294.1 3068400 g266095 i0 38.8 3.28732394366197 98 54 82 2 48 338 1625 1717 GMQ13294.1 DNA-directed RNA polymerase [Cedratvirus Ce2-1] diamond 1167 55.5 1 Viruses Pithoviruses             Cedratvirus Ce2-1
29189138 29189138 PRJNA1237347_P_NODE_408789_length_276_cov_1.197044_g402216_i0 PRJNA1237347 408789 276 1.197044 3.30384144 Solumvirus sp. 2487773 Viruses Viruses 52.4 2.13e-5   NR AYV86402.1 2487773 g402216 i0 31.6 0.858695652173913 79 51 85.9 1 23 259 38 113 AYV86402.1 MAG: hypothetical protein Solumvirus9_2 [Solumvirus sp.] diamond 237 52.4 1 Viruses Pithoviruses             Solumvirus sp.
29883456 29883456 PRJNA1237347_P_NODE_127511_length_582_cov_2.039293_g120989_i0 PRJNA1237347 127511 582 2.039293 11.86868526 Solumvirus sp. 2487773 Viruses Viruses 202 4.62e-62   NR AYV86227.1 2487773 g120989 i0 70 0.721649484536082 140 42 72.2 0 569 150 41 180 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 420 202 1 Viruses Pithoviruses             Solumvirus sp.
30263235 30263235 PRJNA1237347_P_NODE_74312_length_824_cov_2.628495_g68378_i0 PRJNA1237347 74312 824 2.628495 21.6587988 Pithovirus LCPAC1 2506586 Viruses Viruses 114 3.55e-25   NR QBK89990.1 2506586 g68378 i0 28.8 1.04854368932039 288 167 91 8 750 1 5 292 QBK89990.1 MAG: phosphoribosyl transferase domain protein [Pithovirus LCPAC101] diamond 864 114 1 Viruses Pithoviruses             Pithovirus LCPAC101
30294465 30294465 PRJNA1237347_P_NODE_204772_length_427_cov_1.299435_g198200_i0 PRJNA1237347 204772 427 1.299435 5.54858745 Solumvirus sp. 2487773 Viruses Viruses 82.4 2.98e-15   NR AYV86402.1 2487773 g198200 i0 38.9 0.793911007025761 113 68 79.4 1 52 390 38 149 AYV86402.1 MAG: hypothetical protein Solumvirus9_2 [Solumvirus sp.] diamond 339 82.4 1 Viruses Pithoviruses             Solumvirus sp.
31147177 31147177 PRJNA1237347_P_NODE_543855_length_242_cov_1.260355_g537282_i0 PRJNA1237347 543855 242 1.260355 3.0500591 Pithovirus LCPAC3 2506594 Viruses Viruses 50.4 7.17e-5   NR QBK92355.1 2506594 g537282 i0 37.5 0.892561983471074 72 44 89.3 1 225 10 147 217 QBK92355.1 MAG: DEAD-like helicase family protein [Pithovirus LCPAC304] diamond 216 50.4 1 Viruses Pithoviruses             Pithovirus LCPAC304

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;