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contig_metadata

12 rows where bioproject = "PRJNA1237347", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 12 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 12 ✖

bioproject 1

  • PRJNA1237347 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1614013 1614013 PRJNA1237347_P_NODE_244202_length_380_cov_1.736156_g237629_i0 PRJNA1237347 244202 380 1.736156 6.5973928 Methanothermobacter sp. CaT2 866790 Archaea Archaea 89.8 2.76e-13   NTclustered gi|427188531|dbj|AP011952.1| 866790 g237629 i0 94.737 1.74473684210526 57 3 15 0 69 125 5369 5425 Methanothermobacter sp. CaT2 DNA, complete genome blastn 663 89.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter sp. CaT2
1617201 1617201 PRJNA1237347_P_NODE_407702_length_276_cov_1.896552_g401129_i0 PRJNA1237347 407702 276 1.896552 5.23448352 Methanobrevibacter arboriphilus 39441 Archaea Archaea 52.8 0.025   NTclustered gi|2047640843|dbj|AP019779.1| 39441 g401129 i0 88.636 0.304347826086957 44 4 16 1 140 182 270610 270653 Methanobrevibacter arboriphilus SA DNA, complete genome blastn 84 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
13099278 13099278 PRJNA1237347_P_NODE_564011_length_230_cov_4.439490_g557437_i0 PRJNA1237347 564011 230 4.43949 10.210827 uncultured Methanobacterium sp. 176306 Archaea Archaea 52.8 0.021   NTclustered gi|2621703503|emb|OY762552.1| 176306 g557437 i0 100 0.121739130434783 28 0 12 0 122 149 202712 202739 MAG: uncultured Methanobacterium sp. isolate 3f2017ab-9e69-417f-80a5-32741c1572f8 genome assembly, chromosome: 1 blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium uncultured Methanobacterium sp.
14369971 14369971 PRJNA1237347_P_NODE_320732_length_320_cov_1.870445_g314159_i0 PRJNA1237347 320732 320 1.870445 5.985424 Methanofervidicoccus sp. A16 2607662 Archaea Archaea 52.8 0.03   NTclustered gi|1438970377|gb|CP022242.1| 2607662 g314159 i0 96.774 0.096875 31 1 10 0 290 320 741381 741351 Methanofervidicoccus sp. A16 chromosome, complete genome blastn 31 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales   Methanofervidicoccus Methanofervidicoccus sp. A16
27249608 27249608 PRJNA1237347_P_NODE_312603_length_325_cov_2.555556_g306030_i0 PRJNA1237347 312603 325 2.555556 8.305557 Methanobacteriati 3366610 Archaea Archaea 78.2 2.86e-14   NR WP_323736449.1 1452353 g306030 i0 41.5 13.6984615384615 106 54 97.8 2 323 6 227 324 WP_323736449.1 translation elongation factor EF-1 subunit alpha [Methanosphaera sp. ISO3-F5] diamond 4452 78.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5
29062895 29062895 PRJNA1237347_P_NODE_453948_length_257_cov_24.885870_g447375_i0 PRJNA1237347 453948 257 24.88587 63.9566859 Methanothermococcus sp. 2614238 Archaea Archaea 40.8 0.0269   NR MDK2988154.1 2614238 g447375 i0 41.5 0.618677042801556 53 27 59.5 2 239 87 6 56 MDK2988154.1 inorganic phosphate transporter, PiT family [Methanothermococcus sp.] diamond 159 40.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanothermococcus Methanothermococcus sp.
29396816 29396816 PRJNA1237347_P_NODE_338069_length_310_cov_1.299578_g331496_i0 PRJNA1237347 338069 310 1.299578 4.0286918 root 1 Root_unresolved Root_unresolved 114 1.79e-27   NR WP_013179903.1 2188 g331496 i0 53.9 3.03870967741935 102 46 98.7 1 308 3 240 340 WP_013179903.1 restriction endonuclease subunit S [Methanococcus voltae] diamond 942 114 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus voltae
29851731 29851731 PRJNA1237347_P_NODE_104651_length_662_cov_1.273345_g98220_i0 PRJNA1237347 104651 662 1.273345 8.4295439 Methanothermobacter sp. THM-1 2606911 Archaea Archaea 47 0.0355   NR WP_191216576.1 2606911 g98220 i0 34.4 0.276435045317221 61 38 27.2 2 482 661 71 130 WP_191216576.1 DUF7411 family protein [Methanothermobacter sp. THM-1] diamond 183 47 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter sp. THM-1
30186202 30186202 PRJNA1237347_P_NODE_12992_length_2205_cov_2.011257_g11222_i0 PRJNA1237347 12992 2205 2.011257 44.34821685 root 1 Root_unresolved Root_unresolved 87.4 9.58e-14   NR WP_296885388.1 253161 g11222 i0 24.2 2.85034013605442 537 311 70.7 18 1824 265 122 579 WP_296885388.1 IGHMBP2 family helicase [uncultured Methanobrevibacter sp.] diamond 6285 87.8 0.995444191343964 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
31084112 31084112 PRJNA1237347_P_NODE_288135_length_342_cov_2.468401_g281562_i0 PRJNA1237347 288135 342 2.468401 8.44193142 Methanobrevibacter smithii 2173 Archaea Archaea 48.1 0.00152   NR WP_244371746.1 2173 g281562 i0 29.2 2.34210526315789 89 56 78.1 1 332 66 496 577 WP_244371746.1 Ig-like domain repeat protein [Methanobrevibacter smithii] diamond 801 48.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
32114879 32114879 PRJNA1237347_P_NODE_301658_length_333_cov_1.176923_g295085_i0 PRJNA1237347 301658 333 1.176923 3.91915359 root 1 Root_unresolved Root_unresolved 132 2.74e-33   NR WP_181488698.1 39152 g295085 i0 60.6 5.9009009009009 109 42 97.3 1 331 8 562 670 WP_181488698.1 N-6 DNA methylase [Methanococcus maripaludis] diamond 1965 132 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis
32381035 32381035 PRJNA1237347_P_NODE_293339_length_339_cov_1.007519_g286766_i0 PRJNA1237347 293339 339 1.007519 3.41548941 Methanobrevibacter sp. 66852 Archaea Archaea 44.3 0.0332   NR WP_330026081.1 66852 g286766 i0 30.7 0.893805309734513 101 67 88.5 2 33 332 1515 1613 WP_330026081.1 right-handed parallel beta-helix repeat-containing protein, partial [Methanobrevibacter sp.] diamond 303 44.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;