contig_metadata
19 rows where bioproject = "PRJNA1237347", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2892953 | 2892953 | PRJNA1237347_P_NODE_383003_length_287_cov_1.149533_g376430_i0 | PRJNA1237347 | 383003 | 287 | 1.149533 | 3.29915971 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 52.8 | 0.027 | NTclustered | gi|1958056460|gb|CP064986.1| | 2052160 | g376430 | i0 | 100 | 0.0975609756097561 | 28 | 0 | 10 | 0 | 37 | 64 | 4089971 | 4089998 | Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 9265622 | 9265622 | PRJNA1237347_P_NODE_157628_length_507_cov_1.417051_g151069_i0 | PRJNA1237347 | 157628 | 507 | 1.417051 | 7.18444857 | Candidatus Fibrimonadales bacterium | 2604144 | Bacteria | Bacteria | 163 | 1.2299999999999996e-43 | NR | MCL2282292.1 | 2604144 | g151069 | i0 | 52.9 | 7.03550295857988 | 170 | 65 | 95.3 | 5 | 502 | 20 | 436 | 599 | MCL2282292.1 SUMF1/EgtB/PvdO family nonheme iron enzyme [Candidatus Fibrimonadales bacterium] | diamond | 3567 | 163 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Candidatus Fibrimonadales | Candidatus Fibrimonadales bacterium | |||
| 20742433 | 20742433 | PRJNA1237347_P_NODE_32157_length_1371_cov_6.638675_g28447_i0 | PRJNA1237347 | 32157 | 1371 | 6.638675 | 91.01623425 | Chitinivibrionales bacterium | 2663014 | Bacteria | Bacteria | 577 | 1.3e-202 | NR | MDD5675296.1 | 2663014 | g28447 | i0 | 63 | 3.81838074398249 | 432 | 157 | 94.5 | 2 | 39 | 1334 | 3 | 431 | MDD5675296.1 xylose isomerase [Chitinivibrionales bacterium] | diamond | 5235 | 577 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Chitinivibrionia | Chitinivibrionales | Chitinivibrionales bacterium | |||
| 22725087 | 22725087 | PRJNA1237347_P_NODE_291898_length_340_cov_1.078652_g285325_i0 | PRJNA1237347 | 291898 | 340 | 1.078652 | 3.6674168 | Fibrobacteria bacterium | 2725311 | Bacteria | Bacteria | 175 | 7.53e-52 | NR | MEO6097618.1 | 2725311 | g285325 | i0 | 67 | 3.67941176470588 | 112 | 33 | 98.8 | 2 | 5 | 340 | 83 | 190 | MEO6097618.1 oxygen-dependent coproporphyrinogen oxidase [Fibrobacteria bacterium] | diamond | 1251 | 175 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacteria bacterium | ||||
| 26914758 | 26914758 | PRJNA1237347_P_NODE_270502_length_356_cov_2.745583_g263929_i0 | PRJNA1237347 | 270502 | 356 | 2.745583 | 9.77427548 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 82.4 | 1.64e-15 | NR | MFP4521691.1 | 2052160 | g263929 | i0 | 52.4 | 0.707865168539326 | 84 | 37 | 69.9 | 2 | 345 | 97 | 190 | 271 | MFP4521691.1 ribonuclease R family protein [Fibrobacterota bacterium] | diamond | 252 | 82.4 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 27009430 | 27009430 | PRJNA1237347_P_NODE_137822_length_553_cov_2.950000_g131286_i0 | PRJNA1237347 | 137822 | 553 | 2.95 | 16.3135 | Candidatus Fibrimonadaceae bacterium | 2872174 | Bacteria | Bacteria | 47 | 0.0216 | NR | MDR2582926.1 | 2872174 | g131286 | i0 | 28.7 | 0.661844484629295 | 122 | 65 | 64 | 5 | 198 | 551 | 637 | 740 | MDR2582926.1 NPCBM/NEW2 domain-containing protein [Candidatus Fibrimonadaceae bacterium] | diamond | 366 | 47 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Candidatus Fibrimonadales | Candidatus Fibrimonadaceae | Candidatus Fibrimonadaceae bacterium | ||
| 27294423 | 27294423 | PRJNA1237347_P_NODE_404963_length_277_cov_2.264706_g398390_i0 | PRJNA1237347 | 404963 | 277 | 2.264706 | 6.27323562 | Fibrobacteria bacterium | 2725311 | Bacteria | Bacteria | 62.4 | 6.79e-9 | NR | HKP94129.1 | 2725311 | g398390 | i0 | 53.2 | 0.671480144404332 | 62 | 26 | 66.1 | 2 | 94 | 276 | 31 | 90 | HKP94129.1 bifunctional metallophosphatase/5'-nucleotidase [Fibrobacteria bacterium] | diamond | 186 | 62.4 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacteria bacterium | ||||
| 27578862 | 27578862 | PRJNA1237347_P_NODE_68764_length_866_cov_2.264817_g63000_i0 | PRJNA1237347 | 68764 | 866 | 2.264817 | 19.61331522 | Chitinispirillaceae bacterium | 2813024 | Bacteria | Bacteria | 154 | 2.54e-40 | NR | HLV33230.1 | 2813024 | g63000 | i0 | 36.3 | 0.859122401847575 | 248 | 148 | 85.2 | 3 | 854 | 117 | 106 | 345 | HLV33230.1 hypothetical protein [Chitinispirillaceae bacterium] | diamond | 744 | 154 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Chitinispirillia | Chitinispirillales | Chitinispirillaceae | Chitinispirillaceae bacterium | ||
| 28241200 | 28241200 | PRJNA1237347_P_NODE_142806_length_541_cov_1.596154_g136266_i0 | PRJNA1237347 | 142806 | 541 | 1.596154 | 8.63519314 | Fibrobacter sp. UBA4297 | 1946536 | Bacteria | Bacteria | 70.9 | 1.02e-10 | NR | WP_290764917.1 | 1946536 | g136266 | i0 | 28.7 | 3.23844731977819 | 181 | 104 | 98.2 | 6 | 540 | 10 | 229 | 388 | WP_290764917.1 DUF4419 domain-containing protein [Fibrobacter sp. UBA4297] | diamond | 1752 | 70.9 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacterales | Fibrobacteraceae | Fibrobacter | Fibrobacter sp. UBA4297 | |
| 28291580 | 28291580 | PRJNA1237347_P_NODE_373766_length_291_cov_1.243119_g367193_i0 | PRJNA1237347 | 373766 | 291 | 1.243119 | 3.61747629 | Bacteria | 2 | Bacteria | Bacteria | 45.4 | 0.00736 | NR | NLG18811.1 | 35828 | g367193 | i0 | 34.2 | 6.2680412371134 | 73 | 45 | 75.3 | 2 | 234 | 16 | 217 | 286 | NLG18811.1 hypothetical protein [Fibrobacter sp.] | diamond | 1824 | 45.4 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacterales | Fibrobacteraceae | Fibrobacter | Fibrobacter sp. | |
| 28954975 | 28954975 | PRJNA1237347_P_NODE_222628_length_404_cov_1.374622_g216056_i0 | PRJNA1237347 | 222628 | 404 | 1.374622 | 5.55347288 | Bacteria | 2 | Bacteria | Bacteria | 55.8 | 4.68e-6 | NR | MCL2689760.1 | 2604142 | g216056 | i0 | 29.9 | 2.88861386138614 | 137 | 49 | 90.6 | 5 | 18 | 383 | 68 | 172 | MCL2689760.1 AAA family ATPase [Chitinispirillia bacterium] | diamond | 1167 | 55.8 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Chitinispirillia | Chitinispirillia bacterium | ||||
| 29081171 | 29081171 | PRJNA1237347_P_NODE_465528_length_253_cov_1.672222_g458955_i0 | PRJNA1237347 | 465528 | 253 | 1.672222 | 4.23072166 | root | 1 | Root_unresolved | Root_unresolved | 53.9 | 4.55e-6 | NR | WP_290925659.1 | 35828 | g458955 | i0 | 36.6 | 6.79446640316206 | 82 | 44 | 92.5 | 3 | 236 | 3 | 303 | 380 | WP_290925659.1 DUF4419 domain-containing protein [Fibrobacter sp.] | diamond | 1719 | 54.3 | 0.992633517495396 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacterales | Fibrobacteraceae | Fibrobacter | Fibrobacter sp. | |
| 29315277 | 29315277 | PRJNA1237347_P_NODE_404149_length_278_cov_1.126829_g397576_i0 | PRJNA1237347 | 404149 | 278 | 1.126829 | 3.13258462 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 60.8 | 2.53e-8 | NR | MDB5106241.1 | 2052160 | g397576 | i0 | 46.2 | 0.561151079136691 | 52 | 28 | 56.1 | 0 | 277 | 122 | 1688 | 1739 | MDB5106241.1 repeat-containing protein [Fibrobacterota bacterium] | diamond | 156 | 60.8 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 29504390 | 29504390 | PRJNA1237347_P_NODE_232070_length_393_cov_1.718750_g225498_i0 | PRJNA1237347 | 232070 | 393 | 1.71875 | 6.7546875 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 65.5 | 8.69e-11 | NR | MBL8027119.1 | 2052160 | g225498 | i0 | 42.3 | 0.541984732824427 | 71 | 41 | 54.2 | 0 | 214 | 2 | 1 | 71 | MBL8027119.1 hypothetical protein [Fibrobacterota bacterium] | diamond | 213 | 65.5 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 29852133 | 29852133 | PRJNA1237347_P_NODE_415871_length_273_cov_1.370000_g409298_i0 | PRJNA1237347 | 415871 | 273 | 1.37 | 3.7401 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 60.1 | 2.52e-8 | NR | QQS06220.1 | 2052160 | g409298 | i0 | 47.8 | 0.736263736263736 | 67 | 34 | 72.5 | 1 | 1 | 198 | 42 | 108 | QQS06220.1 MAG: ABC transporter ATP-binding protein [Fibrobacterota bacterium] | diamond | 201 | 60.1 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 30799599 | 30799599 | PRJNA1237347_P_NODE_311554_length_326_cov_1.592885_g304981_i0 | PRJNA1237347 | 311554 | 326 | 1.592885 | 5.1928051 | Chitinivibrionales bacterium | 2663014 | Bacteria | Bacteria | 122 | 1.8599999999999998e-32 | NR | MBN1983414.1 | 2663014 | g304981 | i0 | 54.6 | 0.993865030674847 | 108 | 48 | 98.5 | 1 | 321 | 1 | 41 | 148 | MBN1983414.1 hypothetical protein [Chitinivibrionales bacterium] | diamond | 324 | 122 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Chitinivibrionia | Chitinivibrionales | Chitinivibrionales bacterium | |||
| 31526778 | 31526778 | PRJNA1237347_P_NODE_232796_length_392_cov_2.163009_g226224_i0 | PRJNA1237347 | 232796 | 392 | 2.163009 | 8.47899528 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 67.8 | 3.73e-10 | NR | MFH0921663.1 | 2052160 | g226224 | i0 | 44.8 | 1.37755102040816 | 87 | 39 | 63.5 | 3 | 291 | 43 | 4019 | 4100 | MFH0921663.1 DUF2341 domain-containing protein [Fibrobacterota bacterium] | diamond | 540 | 67.8 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 32128277 | 32128277 | PRJNA1237347_P_NODE_48518_length_1075_cov_2.732535_g43672_i0 | PRJNA1237347 | 48518 | 1075 | 2.732535 | 29.37475125 | Chitinivibrionales bacterium | 2663014 | Bacteria | Bacteria | 323 | 2e-105 | NR | HMD69072.1 | 2663014 | g43672 | i0 | 60.6 | 3.27906976744186 | 277 | 109 | 77.3 | 0 | 831 | 1 | 38 | 314 | HMD69072.1 efflux RND transporter periplasmic adaptor subunit [Chitinivibrionales bacterium] | diamond | 3525 | 323 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Chitinivibrionia | Chitinivibrionales | Chitinivibrionales bacterium | |||
| 32854098 | 32854098 | PRJNA1237347_P_NODE_330600_length_314_cov_1.871369_g324027_i0 | PRJNA1237347 | 330600 | 314 | 1.871369 | 5.87609866 | Fibrobacteria bacterium | 2725311 | Bacteria | Bacteria | 151 | 3.12e-40 | NR | MEO6095703.1 | 2725311 | g324027 | i0 | 61.5 | 0.993630573248408 | 104 | 40 | 99.4 | 0 | 2 | 313 | 337 | 440 | MEO6095703.1 isoamylase [Fibrobacteria bacterium] | diamond | 312 | 151 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;