RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1237347", tax_clade = "Caldisericota/Cryosericota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Caldisericota/Cryosericota group · 2 ✖

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31115283 31115283 PRJNA1237347_P_NODE_187715_length_452_cov_1.667546_g181143_i0 PRJNA1237347 187715 452 1.667546 7.53730792 Candidatus Cryosericum odellii 2290917 Bacteria Bacteria 49.3 0.00152   NR WP_243625030.1 2290917 g181143 i0 35.4 1.72566371681416 65 40 43.1 1 127 321 150 212 WP_243625030.1 sugar phosphate nucleotidyltransferase, partial [Candidatus Cryosericum odellii] diamond 780 49.3 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Candidatus Cryosericota Candidatus Cryosericia Candidatus Cryosericales Candidatus Cryosericaceae Candidatus Cryosericum Candidatus Cryosericum odellii
31463532 31463532 PRJNA1237347_P_NODE_168456_length_486_cov_1.338983_g161888_i0 PRJNA1237347 168456 486 1.338983 6.50745738 Candidatus Cryosericum sp. 2815585 Bacteria Bacteria 138 2.62e-34   NR HPS70411.1 2815585 g161888 i0 49.1 0.981481481481482 159 79 96.9 2 482 12 1003 1161 HPS70411.1 tandem-95 repeat protein [Candidatus Cryosericum sp.] diamond 477 138 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Candidatus Cryosericota Candidatus Cryosericia Candidatus Cryosericales Candidatus Cryosericaceae Candidatus Cryosericum Candidatus Cryosericum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;