RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1237347", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Goldiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Goldiibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA1237347 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30135750 30135750 PRJNA1237347_P_NODE_208252_length_422_cov_1.713467_g201680_i0 PRJNA1237347 208252 422 1.713467 7.23083074 Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 2013807 Bacteria Bacteria 92.8 8.71e-19   NR PKL92061.1 2013807 g201680 i0 38.8 0.917061611374408 129 78 91.7 1 390 4 57 184 PKL92061.1 MAG: hypothetical protein CVV21_04750 [Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1] diamond 387 92.8 1 Bacteria Bacteria candidate phyla   Candidatus Goldiibacteriota         Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;