RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where bioproject = "PRJNA1233465" and tax_phylum = "Minisyncoccota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA1233465 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25696267 25696267 PRJNA1233465f_S_NODE_66826_length_283_cov_2.641026_g64546_i0 PRJNA1233465 66826 283 2.641026 7.47410358 Minisyncoccota bacterium 2053589 Bacteria Bacteria 141 6.88e-40   NR MDD3663375.1 2053589 g64546 i0 73.4 1.99293286219081 94 24 99.6 1 282 1 11 103 MDD3663375.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 564 141 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
25807642 25807642 PRJNA1233465a_S_NODE_77763_length_252_cov_1.270936_g76489_i0 PRJNA1233465 77763 252 1.270936 3.20275872 Candidatus Paceibacterota bacterium 1752724 Bacteria Bacteria 60.2 1.37e-4   NTclustered gi|2621706115|emb|OY764332.1| 2053589 g76489 i0 90.909 0.28968253968254 44 4 17 0 12 55 210338 210381 MAG: Candidatus Paceibacterota bacterium isolate afe48dc8-71d9-430e-8630-11ffabd708cb genome assembly, chromosome: 1 blastn 73 60.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26354208 26354208 PRJNA1233465b_S_NODE_219711_length_201_cov_1.447368_g218026_i0 PRJNA1233465 219711 201 1.447368 2.90920968 Candidatus Paceibacterota bacterium 1752724 Bacteria Bacteria 60.2 1.04e-4   NTclustered gi|2621706115|emb|OY764332.1| 2053589 g218026 i0 90.909 0.36318407960199 44 4 22 0 30 73 210338 210381 MAG: Candidatus Paceibacterota bacterium isolate afe48dc8-71d9-430e-8630-11ffabd708cb genome assembly, chromosome: 1 blastn 73 60.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26513459 26513459 PRJNA1233465f_S_NODE_79552_length_263_cov_2.205607_g77272_i0 PRJNA1233465 79552 263 2.205607 5.80074641 Minisyncoccota bacterium 2053589 Bacteria Bacteria 149 1.53e-39   NR HRH24067.1 2053589 g77272 i0 86.2 1.98479087452471 87 12 99.2 0 262 2 418 504 HRH24067.1 preprotein translocase subunit SecA [Candidatus Paceibacterota bacterium] diamond 522 149 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32915147 32915147 PRJNA1233465b_S_NODE_252937_length_189_cov_1.457143_g251252_i0 PRJNA1233465 252937 189 1.457143 2.75400027 Minisyncoccota bacterium 2053589 Bacteria Bacteria 75.1 5.11e-14   NR MFA6258464.1 2053589 g251252 i0 56.5 0.984126984126984 62 27 98.4 0 189 4 38 99 MFA6258464.1 trigger factor [Candidatus Paceibacterota bacterium] diamond 186 75.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32915245 32915245 PRJNA1233465b_S_NODE_306385_length_173_cov_1.645161_g304700_i0 PRJNA1233465 306385 173 1.645161 2.84612853 Candidatus Pacebacteria bacterium CG1 1974769 Bacteria Bacteria 61.2 4.28e-9   NR PIR61444.1 1974769 g304700 i0 65.2 0.797687861271676 46 15 78 1 145 11 442 487 PIR61444.1 MAG: hypothetical protein COU66_03735 [Candidatus Pacebacteria bacterium CG10_big_fil_rev_8_21_14_0_10_44_11] diamond 138 61.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Candidatus Pacebacteria bacterium CG10_big_fil_rev_8_21_14_0_10_44_11
32915321 32915321 PRJNA1233465b_S_NODE_353497_length_164_cov_0.886957_g351812_i0 PRJNA1233465 353497 164 0.886957 1.45460948 Minisyncoccota bacterium 2053589 Bacteria Bacteria 44.7 0.00266   NR HEY9586249.1 2053589 g351812 i0 81.5 0.49390243902439 27 5 49.4 0 83 3 1 27 HEY9586249.1 extracellular solute-binding protein [Candidatus Paceibacterota bacterium] diamond 81 44.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32915970 32915970 PRJNA1233465d_S_NODE_95273_length_186_cov_1.445255_g94162_i0 PRJNA1233465 95273 186 1.445255 2.6881743 Minisyncoccota bacterium 2053589 Bacteria Bacteria 110 3.27e-26   NR HEX8591211.1 2053589 g94162 i0 85.2 1.96774193548387 61 9 98.4 0 185 3 412 472 HEX8591211.1 preprotein translocase subunit SecA [Candidatus Paceibacterota bacterium] diamond 366 110 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32916037 32916037 PRJNA1233465e_S_NODE_115345_length_182_cov_1.150376_g114035_i0 PRJNA1233465 115345 182 1.150376 2.09368432 Minisyncoccota bacterium 2053589 Bacteria Bacteria 48.9 1e-4   NR MFM7087998.1 2053589 g114035 i0 48.9 0.774725274725275 47 22 77.5 1 177 37 149 193 MFM7087998.1 endonuclease/exonuclease/phosphatase family protein [Candidatus Paceibacterota bacterium] diamond 141 48.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32932118 32932118 PRJNA1233465b_S_NODE_177681_length_220_cov_1.362573_g175996_i0 PRJNA1233465 177681 220 1.362573 2.9976606 Minisyncoccota bacterium 2053589 Bacteria Bacteria 119 8.189999999999998e-30   NR HWO07719.1 2053589 g175996 i0 78.1 0.995454545454545 73 15 99.5 1 219 1 52 123 HWO07719.1 chromosomal replication initiator protein DnaA [Candidatus Paceibacterota bacterium] diamond 219 119 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32932906 32932906 PRJNA1233465d_S_NODE_44681_length_255_cov_1.237864_g43570_i0 PRJNA1233465 44681 255 1.237864 3.1565532 Minisyncoccota bacterium 2053589 Bacteria Bacteria 63.9 2.39e-11   NR HRH24432.1 2053589 g43570 i0 74.5 0.552941176470588 47 12 55.3 0 143 3 1 47 HRH24432.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 141 63.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32949215 32949215 PRJNA1233465b_S_NODE_113522_length_262_cov_5.051643_g111837_i0 PRJNA1233465 113522 262 5.051643 13.23530466 Minisyncoccota bacterium 2053589 Bacteria Bacteria 61.6 6.25e-9   NR HRH24372.1 2053589 g111837 i0 51.5 0.755725190839695 66 31 74.4 1 68 262 1 66 HRH24372.1 DUF1295 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 198 61.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32958120 32958120 PRJNA1233465e_S_NODE_15850_length_420_cov_1.633423_g14555_i0 PRJNA1233465 15850 420 1.633423 6.8603766 Pseudomonadati 3379134 Bacteria Bacteria 95.9 1.27e-20   NR MDR3571215.1 2053589 g14555 i0 87.3 3.15 55 7 39.3 0 256 420 58 112 MDR3571215.1 AraC family transcriptional regulator [Candidatus Paceibacterota bacterium] diamond 1323 96.3 0.995846313603323 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32984282 32984282 PRJNA1233465d_S_NODE_49019_length_245_cov_1.821429_g47908_i0 PRJNA1233465 49019 245 1.821429 4.46250105 Minisyncoccota bacterium 2053589 Bacteria Bacteria 87.4 6.91e-20   NR HWH06924.1 2053589 g47908 i0 53.5 1.0530612244898 86 26 99.2 2 1 243 59 135 HWH06924.1 PrgI family protein [Candidatus Paceibacterota bacterium] diamond 258 87.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32984328 32984328 PRJNA1233465d_S_NODE_59435_length_226_cov_1.711864_g58324_i0 PRJNA1233465 59435 226 1.711864 3.86881264 Candidatus Pacebacteria bacterium GW2 1618471 Bacteria Bacteria 55.5 1.37e-7   NR KKQ09720.1 1618471 g58324 i0 56.4 0.517699115044248 39 17 51.8 0 124 8 53 91 KKQ09720.1 MAG: hypothetical protein US20_C0005G0040, partial [Candidatus Pacebacteria bacterium GW2011_GWF1_36_5] diamond 117 55.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Candidatus Pacebacteria bacterium GW2011_GWF1_36_5
33008952 33008952 PRJNA1233465b_S_NODE_114307_length_262_cov_1.291080_g112622_i0 PRJNA1233465 114307 262 1.29108 3.3826296 Bacteria 2 Bacteria Bacteria 43.1 0.0298   NR HRT08691.1 2053589 g112622 i0 60 0.744274809160305 30 12 34.4 0 170 81 208 237 HRT08691.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 195 43.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
33018703 33018703 PRJNA1233465e_S_NODE_149724_length_165_cov_1.172414_g148414_i0 PRJNA1233465 149724 165 1.172414 1.9344831 Minisyncoccota bacterium 2053589 Bacteria Bacteria 98.6 2.86e-22   NR HEX8591211.1 2053589 g148414 i0 83.6 2 55 9 100 0 1 165 415 469 HEX8591211.1 preprotein translocase subunit SecA [Candidatus Paceibacterota bacterium] diamond 330 98.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
33018791 33018791 PRJNA1233465e_S_NODE_24484_length_350_cov_1.189369_g23174_i0 PRJNA1233465 24484 350 1.189369 4.1627915 Minisyncoccota bacterium 2053589 Bacteria Bacteria 152 9.54e-45   NR HEX2792397.1 2053589 g23174 i0 66.7 0.874285714285714 102 34 87.4 0 309 4 3 104 HEX2792397.1 rRNA maturation RNase YbeY [Candidatus Paceibacterota bacterium] diamond 306 152 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
33052589 33052589 PRJNA1233465d_S_NODE_84413_length_195_cov_3.294521_g83302_i0 PRJNA1233465 84413 195 3.294521 6.42431595 Minisyncoccota bacterium 2053589 Bacteria Bacteria 54.3 1.65e-6   NR HNW71646.1 2053589 g83302 i0 51.9 0.8 52 24 78.5 1 33 185 1006 1057 HNW71646.1 DUF5011 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 156 54.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
33069127 33069127 PRJNA1233465d_S_NODE_103869_length_180_cov_0.969466_g102758_i0 PRJNA1233465 103869 180 0.969466 1.7450388 Minisyncoccota bacterium 2053589 Bacteria Bacteria 41.6 0.0415   NR HEY4475117.1 2053589 g102758 i0 43.1 1.08333333333333 65 27 93.3 3 1 168 93 156 HEY4475117.1 protein translocase subunit SecF [Candidatus Paceibacterota bacterium] diamond 195 41.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
33104608 33104608 PRJNA1233465f_S_NODE_145006_length_203_cov_4.428571_g142726_i0 PRJNA1233465 145006 203 4.428571 8.98999913 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.6 2.87e-7   NR HNW71646.1 2053589 g142726 i0 47.7 0.960591133004926 65 29 94.6 2 3 194 997 1057 HNW71646.1 DUF5011 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 195 56.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
33137714 33137714 PRJNA1233465d_S_NODE_36463_length_278_cov_1.960699_g35352_i0 PRJNA1233465 36463 278 1.960699 5.45074322 Minisyncoccota bacterium 2053589 Bacteria Bacteria 137 2.2e-39   NR HEX2792397.1 2053589 g35352 i0 67 2.94604316546763 91 30 98.2 0 3 275 14 104 HEX2792397.1 rRNA maturation RNase YbeY [Candidatus Paceibacterota bacterium] diamond 819 137 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
33145693 33145693 PRJNA1233465d_S_NODE_42159_length_261_cov_1.924528_g41048_i0 PRJNA1233465 42159 261 1.924528 5.02301808 Pseudomonadati 3379134 Bacteria Bacteria 112 6.12e-28   NR MDR3571215.1 2053589 g41048 i0 84.5 6.52873563218391 71 10 81.6 1 214 2 58 127 MDR3571215.1 AraC family transcriptional regulator [Candidatus Paceibacterota bacterium] diamond 1704 112 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;