RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1233465" and tax_phylum = "Candidatus Staskawicziibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Staskawicziibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1233465 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32951717 32951717 PRJNA1233465f_S_NODE_97626_length_241_cov_3.692708_g95346_i0 PRJNA1233465 97626 241 3.692708 8.89942628 Candidatus Staskawiczbacteria bacterium 2053617 Bacteria Bacteria 127 3.78e-32   NR HQK63857.1 2053617 g95346 i0 80.5 2.80082987551867 77 15 95.9 0 241 11 600 676 HQK63857.1 polyribonucleotide nucleotidyltransferase [Candidatus Staskawiczbacteria bacterium] diamond 675 127 1 Bacteria Bacteria candidate phyla   Candidatus Staskawicziibacteriota         Candidatus Staskawiczbacteria bacterium
33086481 33086481 PRJNA1233465d_S_NODE_25630_length_324_cov_2.403636_g24519_i0 PRJNA1233465 25630 324 2.403636 7.78778064 Candidatus Staskawiczbacteria bacterium 2053617 Bacteria Bacteria 162 3.36e-44   NR HQK63857.1 2053617 g24519 i0 81.4 1.76851851851852 97 18 89.8 0 301 11 580 676 HQK63857.1 polyribonucleotide nucleotidyltransferase [Candidatus Staskawiczbacteria bacterium] diamond 573 162 1 Bacteria Bacteria candidate phyla   Candidatus Staskawicziibacteriota         Candidatus Staskawiczbacteria bacterium
33104037 33104037 PRJNA1233465e_S_NODE_156190_length_163_cov_1.789474_g154880_i0 PRJNA1233465 156190 163 1.789474 2.91684262 Candidatus Staskawiczbacteria bacterium 2053617 Bacteria Bacteria 94.7 6.15e-21   NR HQK63857.1 2053617 g154880 i0 81.5 0.993865030674847 54 10 99.4 0 1 162 595 648 HQK63857.1 polyribonucleotide nucleotidyltransferase [Candidatus Staskawiczbacteria bacterium] diamond 162 94.7 1 Bacteria Bacteria candidate phyla   Candidatus Staskawicziibacteriota         Candidatus Staskawiczbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;