RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA1233465" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1233465 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25945690 25945690 PRJNA1233465b_S_NODE_185892_length_216_cov_1.221557_g184207_i0 PRJNA1233465 185892 216 1.221557 2.63856312 Candidatus Hydrogenedentales bacterium 3120109 Bacteria Bacteria 117 9.63e-29   NR MFA6242299.1 3120109 g184207 i0 80.6 2 72 14 100 0 1 216 40 111 MFA6242299.1 UvrD-helicase domain-containing protein [Candidatus Hydrogenedentales bacterium] diamond 432 117 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales     Candidatus Hydrogenedentales bacterium
32966938 32966938 PRJNA1233465b_S_NODE_62162_length_326_cov_2.862816_g60477_i0 PRJNA1233465 62162 326 2.862816 9.33278016 Candidatus Hydrogenedentales bacterium 3120109 Bacteria Bacteria 81.3 2.96e-15   NR MFA6242299.1 3120109 g60477 i0 43.5 0.993865030674847 108 59 99.4 1 3 326 472 577 MFA6242299.1 UvrD-helicase domain-containing protein [Candidatus Hydrogenedentales bacterium] diamond 324 81.3 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales     Candidatus Hydrogenedentales bacterium
33000574 33000574 PRJNA1233465b_S_NODE_238235_length_194_cov_1.613793_g236550_i0 PRJNA1233465 238235 194 1.613793 3.13075842 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 85.1 2.84e-18   NR MDZ4860303.1 2030809 g236550 i0 58.1 0.958762886597938 62 26 95.9 0 188 3 122 183 MDZ4860303.1 TylF/MycF/NovP-related O-methyltransferase [Candidatus Hydrogenedentota bacterium] diamond 186 85.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
33019323 33019323 PRJNA1233465f_S_NODE_169884_length_190_cov_1.808511_g167604_i0 PRJNA1233465 169884 190 1.808511 3.4361709 Candidatus Hydrogenedentales bacterium 3120109 Bacteria Bacteria 79 3.08e-15   NR MFA6242299.1 3120109 g167604 i0 63 0.852631578947368 54 20 85.3 0 188 27 620 673 MFA6242299.1 UvrD-helicase domain-containing protein [Candidatus Hydrogenedentales bacterium] diamond 162 79 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales     Candidatus Hydrogenedentales bacterium
33070588 33070588 PRJNA1233465f_S_NODE_231181_length_167_cov_1.932203_g228901_i0 PRJNA1233465 231181 167 1.932203 3.22677901 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 77 1.09e-14   NR MCC6487429.1 2030809 g228901 i0 58.8 2.69461077844311 51 21 91.6 0 154 2 716 766 MCC6487429.1 amino acid adenylation domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 450 77 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
33087866 33087866 PRJNA1233465f_S_NODE_281230_length_151_cov_3.088235_g278950_i0 PRJNA1233465 281230 151 3.088235 4.66323485 Candidatus Hydrogenedentales bacterium 3120109 Bacteria Bacteria 47.8 1.83e-4   NR MFA6242298.1 3120109 g278950 i0 51 1.94701986754967 49 24 97.4 0 151 5 559 607 MFA6242298.1 AAA family ATPase [Candidatus Hydrogenedentales bacterium] diamond 294 47.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales     Candidatus Hydrogenedentales bacterium
33119455 33119455 PRJNA1233465a_S_NODE_242391_length_162_cov_1.353982_g241117_i0 PRJNA1233465 242391 162 1.353982 2.19345084 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 64.3 2.96e-10   NR MBX3177954.1 2030809 g241117 i0 56.9 8.53703703703704 51 22 94.4 0 160 8 473 523 MBX3177954.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 1383 64.3 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
33153629 33153629 PRJNA1233465a_S_NODE_26216_length_372_cov_2.702786_g24942_i0 PRJNA1233465 26216 372 2.702786 10.05436392 Candidatus Hydrogenedentales bacterium 3120109 Bacteria Bacteria 81.3 5.09e-15   NR MFA6242299.1 3120109 g24942 i0 43.4 0.911290322580645 113 62 91.1 1 340 2 466 576 MFA6242299.1 UvrD-helicase domain-containing protein [Candidatus Hydrogenedentales bacterium] diamond 339 81.3 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales     Candidatus Hydrogenedentales bacterium
33171742 33171742 PRJNA1233465d_S_NODE_136784_length_163_cov_1.833333_g135673_i0 PRJNA1233465 136784 163 1.833333 2.98833279 Candidatus Hydrogenedentales bacterium 3120109 Bacteria Bacteria 48.9 8.49e-5   NR MFA6242298.1 3120109 g135673 i0 51 0.938650306748466 51 25 93.9 0 163 11 559 609 MFA6242298.1 AAA family ATPase [Candidatus Hydrogenedentales bacterium] diamond 153 48.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales     Candidatus Hydrogenedentales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;