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contig_metadata

6 rows where bioproject = "PRJNA1233465", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 6 ✖

tax_kingdom 1

  • Methanobacteriati · 6 ✖

bioproject 1

  • PRJNA1233465 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32934415 32934415 PRJNA1233465f_S_NODE_80833_length_261_cov_4.985849_g78553_i0 PRJNA1233465 80833 261 4.985849 13.01306589 Thermoplasmata archaeon 1906666 Archaea Archaea 48.1 2.24e-4   NR MEE8232833.1 1906666 g78553 i0 48.9 0.517241379310345 45 21 51.7 1 220 86 1 43 MEE8232833.1 hypothetical protein [Thermoplasmata archaeon] diamond 135 48.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32984429 32984429 PRJNA1233465d_S_NODE_86579_length_193_cov_2.638889_g85468_i0 PRJNA1233465 86579 193 2.638889 5.09305577 Thermoplasmata archaeon 1906666 Archaea Archaea 48.1 9.72e-5   NR MEE8232833.1 1906666 g85468 i0 48.9 0.699481865284974 45 21 69.9 1 3 137 1 43 MEE8232833.1 hypothetical protein [Thermoplasmata archaeon] diamond 135 48.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
33034455 33034455 PRJNA1233465a_S_NODE_96396_length_232_cov_2.409836_g95122_i0 PRJNA1233465 96396 232 2.409836 5.59081952 Thermoplasmata archaeon 1906666 Archaea Archaea 42.4 0.0412   NR NIT79650.1 1906666 g95122 i0 35.8 0.685344827586207 53 33 67.2 1 219 64 210 262 NIT79650.1 hypothetical protein [Thermoplasmata archaeon] diamond 159 42.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
33036094 33036094 PRJNA1233465e_S_NODE_85204_length_206_cov_0.929936_g83894_i0 PRJNA1233465 85204 206 0.929936 1.91566816 Candidatus Poseidoniaceae archaeon 2666346 Archaea Archaea 43.1 0.0166   NR MDP6865212.1 2666346 g83894 i0 37.1 0.902912621359223 62 35 84.5 1 9 182 87 148 MDP6865212.1 twin-arginine translocase subunit TatC [Candidatus Poseidoniaceae archaeon] diamond 186 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae   Candidatus Poseidoniaceae archaeon
33077070 33077070 PRJNA1233465a_S_NODE_208181_length_170_cov_1.942149_g206907_i0 PRJNA1233465 208181 170 1.942149 3.3016533 root 1 Root_unresolved Root_unresolved 42.4 0.019   NR HYB62798.1 1906666 g206907 i0 45.7 2.61176470588235 46 20 72.4 1 30 152 44 89 HYB62798.1 glycosyltransferase family 4 protein [Thermoplasmata archaeon] diamond 444 42.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
33138518 33138518 PRJNA1233465e_S_NODE_78919_length_212_cov_2.644172_g77609_i0 PRJNA1233465 78919 212 2.644172 5.60564464 Thermoplasmata archaeon 1906666 Archaea Archaea 46.6 4.88e-4   NR MEE8232833.1 1906666 g77609 i0 48.9 0.636792452830189 45 21 63.7 1 198 64 1 43 MEE8232833.1 hypothetical protein [Thermoplasmata archaeon] diamond 135 46.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;