RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

29 rows where bioproject = "PRJNA1233465" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 29 ✖

bioproject 1

  • PRJNA1233465 · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25540131 25540131 PRJNA1233465b_S_NODE_56841_length_336_cov_11.651568_g55156_i0 PRJNA1233465 56841 336 11.651568 39.14926848 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.032   NTclustered gi|9964314|ref|NC_002520.1| 28321 g55156 i0 94.286 0.104166666666667 35 1 10 1 105 138 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
25947216 25947216 PRJNA1233465b_S_NODE_303828_length_174_cov_1.224000_g302143_i0 PRJNA1233465 303828 174 1.224 2.12976 Chlorella virus XW 10507 Viruses Viruses 211 2.28e-50   NTclustered gi|2200493011|gb|OL828820.1| 2922419 g302143 i0 89.412 0.977011494252874 170 15 97 3 7 174 190238 190070 Chlorella virus XW01, complete genome blastn 170 211 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Chlorella virus XW01
26348238 26348238 PRJNA1233465a_S_NODE_159055_length_191_cov_0.922535_g157781_i0 PRJNA1233465 159055 191 0.922535 1.76204185 Indivirus ILV1 1977633 Viruses Viruses 202 1.54e-47   NTclustered gi|1174570775|gb|KY684086.1| 1977633 g157781 i0 88.69 0.879581151832461 168 15 87 4 15 180 146439 146274 Indivirus ILV1 isolate ILV1 clone Indivirus_2, sequence blastn 168 202 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Indivirus Indivirus ILV1
26348973 26348973 PRJNA1233465a_S_NODE_19015_length_419_cov_153.929730_g17748_i0 PRJNA1233465 19015 419 153.92973 644.9655687 Monkeypox virus 10244 Viruses Viruses 54.7 0.011   NTclustered gi|2309594316|gb|OP536747.1| 10244 g17748 i0 100 6.92124105011933 29 0 7 0 96 124 119302 119274 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
26487193 26487193 PRJNA1233465a_S_NODE_38752_length_322_cov_6.978022_g37478_i0 PRJNA1233465 38752 322 6.978022 22.46923084 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.03   NTclustered gi|9964314|ref|NC_002520.1| 28321 g37478 i0 94.286 0.108695652173913 35 1 11 1 97 130 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
26491108 26491108 PRJNA1233465b_S_NODE_27216_length_437_cov_181.618557_g25550_i0 PRJNA1233465 27216 437 181.618557 793.67309409 Monkeypox virus 10244 Viruses Viruses 54.7 0.012   NTclustered gi|2309594316|gb|OP536747.1| 10244 g25550 i0 100 6.63615560640732 29 0 7 0 296 324 119274 119302 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
26495467 26495467 PRJNA1233465d_S_NODE_20832_length_354_cov_25.947541_g19721_i0 PRJNA1233465 20832 354 25.947541 91.85429514 Monkeypox virus 10244 Viruses Viruses 54.7 0.009   NTclustered gi|2309594316|gb|OP536747.1| 10244 g19721 i0 100 8.19209039548023 29 0 8 0 68 96 119302 119274 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
32914664 32914664 PRJNA1233465a_S_NODE_40649_length_317_cov_1.843284_g39375_i0 PRJNA1233465 40649 317 1.843284 5.84321028 Adintovirus puccinia15 3115942 Viruses Viruses 66.2 3.33e-10   NR DBA48645.1 3115942 g39375 i0 41 0.738170347003155 78 33 73.8 2 298 65 236 300 DBA48645.1 MAG TPA_asm: Mael [Adintovirus puccinia15046] diamond 234 66.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus puccinia15046
32932102 32932102 PRJNA1233465b_S_NODE_167385_length_225_cov_3.437500_g165700_i0 PRJNA1233465 167385 225 3.4375 7.734375 Erythrocytic necrosis virus 1543320 Viruses Viruses 100 5.69e-26   NR QCF47522.1 1543320 g165700 i0 87.3 1.45333333333333 55 7 73.3 0 192 28 11 65 QCF47522.1 hypothetical protein, partial [Erythrocytic necrosis virus] diamond 327 100 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
32932449 32932449 PRJNA1233465b_S_NODE_368665_length_161_cov_2.535714_g366980_i0 PRJNA1233465 368665 161 2.535714 4.08249954 Gaeavirus sp. 2487767 Viruses Viruses 70.9 1.46e-12   NR AYV79990.1 2487767 g366980 i0 60.4 0.987577639751553 53 21 98.8 0 161 3 3 55 AYV79990.1 MAG: FLAP-like endonuclease XPG [Gaeavirus sp.] diamond 159 70.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Gaeavirus sp.
32932504 32932504 PRJNA1233465b_S_NODE_52977_length_345_cov_1.364865_g51292_i0 PRJNA1233465 52977 345 1.364865 4.70878425 Adintovirus puccinia15 3115942 Viruses Viruses 66.2 4.52e-10   NR DBA48645.1 3115942 g51292 i0 41 0.678260869565217 78 33 67.8 2 12 245 236 300 DBA48645.1 MAG TPA_asm: Mael [Adintovirus puccinia15046] diamond 234 66.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus puccinia15046
32950626 32950626 PRJNA1233465e_S_NODE_32714_length_308_cov_4.830116_g31404_i0 PRJNA1233465 32714 308 4.830116 14.87675728 Astyanax tetra cavefish adintovirus 2609866 Viruses Viruses 57.4 3.71e-7   NR DAC81253.1 2609866 g31404 i0 55.1 0.974025974025974 49 22 47.7 0 265 119 131 179 DAC81253.1 TPA_asm: penton [Astyanax tetra cavefish adintovirus] diamond 300 57.4 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Astyanax tetra cavefish adintovirus
32967258 32967258 PRJNA1233465d_S_NODE_29194_length_306_cov_2.591440_g28083_i0 PRJNA1233465 29194 306 2.59144 7.9298064 Adintovirus anguilla10665 3115889 Viruses Viruses 57.4 3.59e-7   NR DAC81253.1 3115889 g28083 i0 55.1 0.980392156862745 49 22 48 0 42 188 131 179 DAC81253.1 TPA_asm: penton [Astyanax tetra cavefish adintovirus] diamond 300 57.4 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665
32983925 32983925 PRJNA1233465b_S_NODE_70939_length_311_cov_4.438931_g69254_i0 PRJNA1233465 70939 311 4.438931 13.80507541 Erythrocytic necrosis virus 1543320 Viruses Viruses 46.6 7.59e-4   NR QCF47486.1 1543320 g69254 i0 69.4 0.694533762057878 36 10 33.8 1 2 106 59 94 QCF47486.1 putative RNA-dependent DNA polymerase, partial [Erythrocytic necrosis virus] diamond 216 47 0.991489361702128 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
33000469 33000469 PRJNA1233465b_S_NODE_178363_length_219_cov_13.788235_g176678_i0 PRJNA1233465 178363 219 13.788235 30.19623465 Pimephales minnow adintovirus 2609864 Viruses Viruses 59.3 2.07e-8   NR DAC81394.1 2609864 g176678 i0 66.7 0.534246575342466 39 13 53.4 0 146 30 7 45 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 117 59.3 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
33002495 33002495 PRJNA1233465f_S_NODE_247459_length_164_cov_2.660870_g245179_i0 PRJNA1233465 247459 164 2.66087 4.3638268 Pimephales minnow adintovirus 2609864 Viruses Viruses 58.2 2.71e-8   NR DAC81394.1 2609864 g245179 i0 69.4 0.658536585365854 36 11 65.9 0 109 2 7 42 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 108 58.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
33017912 33017912 PRJNA1233465b_S_NODE_47396_length_358_cov_6.695793_g45711_i0 PRJNA1233465 47396 358 6.695793 23.97093894 Erythrocytic necrosis virus 1543320 Viruses Viruses 72.4 1.22e-13   NR QCF47486.1 1543320 g45711 i0 65.5 0.486033519553073 58 19 48.6 1 238 65 33 89 QCF47486.1 putative RNA-dependent DNA polymerase, partial [Erythrocytic necrosis virus] diamond 174 72.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
33051870 33051870 PRJNA1233465b_S_NODE_323285_length_169_cov_1.275000_g321600_i0 PRJNA1233465 323285 169 1.275 2.15475 Erythrocytic necrosis virus 1543320 Viruses Viruses 62.8 1.22e-10   NR QCF47477.1 1543320 g321600 i0 55.8 1.84615384615385 52 23 92.3 0 169 14 79 130 QCF47477.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 312 62.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
33068230 33068230 PRJNA1233465a_S_NODE_236365_length_163_cov_1.929825_g235091_i0 PRJNA1233465 236365 163 1.929825 3.14561475 Hokovirus HKV1 1977638 Viruses Viruses 70.1 2.86e-12   NR ARF10531.1 1977638 g235091 i0 64 0.920245398773006 50 18 92 0 153 4 95 144 ARF10531.1 hypothetical protein Hokovirus_2_58 [Hokovirus HKV1] diamond 150 70.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Hokovirus Hokovirus HKV1
33068573 33068573 PRJNA1233465b_S_NODE_133437_length_247_cov_1.287879_g131752_i0 PRJNA1233465 133437 247 1.287879 3.18106113 Lake Baikal virophage 9 3086132 Viruses Viruses 43.5 0.0207   NR WPF46692.1 3086132 g131752 i0 39.7 0.825910931174089 68 31 82.6 3 42 245 15 72 WPF46692.1 MAG: hypothetical protein [Lake Baikal virophage 9] diamond 204 43.5 1 Viruses   Bamfordvirae Preplasmiviricota Virophaviricetes Priklausovirales Lavidaviridae   Lake Baikal virophage 9
33070500 33070500 PRJNA1233465f_S_NODE_194813_length_180_cov_0.984733_g192533_i0 PRJNA1233465 194813 180 0.984733 1.7725194 Astyanax tetra cavefish adintovirus 2609866 Viruses Viruses 69.7 4.33e-12   NR DAC81252.1 2609866 g192533 i0 65.2 0.766666666666667 46 16 76.7 0 43 180 263 308 DAC81252.1 TPA_asm: integrase [Astyanax tetra cavefish adintovirus] diamond 138 69.7 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Astyanax tetra cavefish adintovirus
33086219 33086219 PRJNA1233465b_S_NODE_82678_length_295_cov_1.796748_g80993_i0 PRJNA1233465 82678 295 1.796748 5.3004066 Erythrocytic necrosis virus 1543320 Viruses Viruses 64.7 1.96e-11   NR QCF47522.1 1543320 g80993 i0 72.1 0.43728813559322 43 7 43.7 1 273 145 14 51 QCF47522.1 hypothetical protein, partial [Erythrocytic necrosis virus] diamond 129 64.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
33094346 33094346 PRJNA1233465b_S_NODE_191598_length_213_cov_1.554878_g189913_i0 PRJNA1233465 191598 213 1.554878 3.31189014 Klosneuvirus 1977639 Viruses Viruses 50.4 4.99e-5   NR ARF11831.1 1977640 g189913 i0 87.5 1.3943661971831 24 3 33.8 0 139 210 592 615 ARF11831.1 DNA polymerase family B elongation subunit [Klosneuvirus KNV1] diamond 297 50.8 0.992125984251969 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1
33105096 33105096 PRJNA1233465f_S_NODE_55222_length_307_cov_6.205426_g52942_i0 PRJNA1233465 55222 307 6.205426 19.05065782 Astyanax tetra cavefish adintovirus 2609866 Viruses Viruses 57.4 3.71e-7   NR DAC81253.1 2609866 g52942 i0 55.1 0.977198697068404 49 22 47.9 0 264 118 131 179 DAC81253.1 TPA_asm: penton [Astyanax tetra cavefish adintovirus] diamond 300 57.4 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Astyanax tetra cavefish adintovirus
33119789 33119789 PRJNA1233465b_S_NODE_147279_length_237_cov_2.888298_g145594_i0 PRJNA1233465 147279 237 2.888298 6.84526626 Erythrocytic necrosis virus 1543320 Viruses Viruses 54.3 3.44e-7   NR QCF47486.1 1543320 g145594 i0 81.3 0.40506329113924 32 6 40.5 0 98 3 62 93 QCF47486.1 putative RNA-dependent DNA polymerase, partial [Erythrocytic necrosis virus] diamond 96 54.3 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
33153352 33153352 PRJNA1233465a_S_NODE_144056_length_198_cov_7.939597_g142782_i0 PRJNA1233465 144056 198 7.939597 15.72040206 Pimephales minnow adintovirus 2609864 Viruses Viruses 61.2 3.01e-9   NR DAC81394.1 2609864 g142782 i0 68.4 0.575757575757576 38 12 57.6 0 139 26 7 44 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 114 61.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
33153399 33153399 PRJNA1233465a_S_NODE_158584_length_191_cov_1.169014_g157310_i0 PRJNA1233465 158584 191 1.169014 2.23281674 Indivirus ILV1 1977633 Viruses Viruses 53.9 2.09e-6   NR ARF09769.1 1977633 g157310 i0 45.2 0.973821989528796 62 33 97.4 1 191 6 92 152 ARF09769.1 ubiquitin carboxyl-terminal hydrolase [Indivirus ILV1] diamond 186 53.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Indivirus Indivirus ILV1
33171503 33171503 PRJNA1233465b_S_NODE_37552_length_388_cov_14466.946903_g35872_i0 PRJNA1233465 37552 388 14466.946903 56131.75398364 Erythrocytic necrosis virus 1543320 Viruses Viruses 48.1 3.87e-4   NR QCF47486.1 1543320 g35872 i0 62.2 0.572164948453608 37 14 28.6 0 320 210 56 92 QCF47486.1 putative RNA-dependent DNA polymerase, partial [Erythrocytic necrosis virus] diamond 222 48.5 0.991752577319588 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
33172097 33172097 PRJNA1233465d_S_NODE_78712_length_201_cov_1.605263_g77601_i0 PRJNA1233465 78712 201 1.605263 3.22657863 Bodo saltans virus 2024608 Viruses Viruses 48.1 2.65e-4   NR YP_010778859.1 2024608 g77601 i0 47.1 0.761194029850746 51 27 76.1 0 155 3 174 224 YP_010778859.1 DEXDc helicase [Bodo saltans virus] diamond 153 48.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Theiavirus Theiavirus salishense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;