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contig_metadata

23 rows where bioproject = "PRJNA1233465", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 23 ✖

tax_kingdom 1

  • Bacillati · 23 ✖

bioproject 1

  • PRJNA1233465 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25541833 25541833 PRJNA1233465d_S_NODE_127833_length_166_cov_1.273504_g126722_i0 PRJNA1233465 127833 166 1.273504 2.11401664 uncultured Armatimonadaceae bacterium 1579981 Bacteria Bacteria 302 1.2500000000000001e-77   NTclustered gi|1962354638|emb|LR605213.1| 1579981 g126722 i0 99.401 100.518072289157 167 0 100 1 1 166 235 69 uncultured Armatimonadaceae bacterium partial 16S rRNA gene blastn 16686 302 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   uncultured Armatimonadaceae bacterium
25692264 25692264 PRJNA1233465f_S_NODE_215474_length_172_cov_2.349593_g213194_i0 PRJNA1233465 215474 172 2.349593 4.04129996 uncultured Armatimonadaceae bacterium 1579981 Bacteria Bacteria 313 5.989999999999998e-81   NTclustered gi|1962354638|emb|LR605213.1| 1579981 g213194 i0 99.422 100.843023255814 173 0 100 1 1 172 76 248 uncultured Armatimonadaceae bacterium partial 16S rRNA gene blastn 17345 313 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   uncultured Armatimonadaceae bacterium
26163708 26163708 PRJNA1233465a_S_NODE_77845_length_252_cov_1.152709_g76571_i0 PRJNA1233465 77845 252 1.152709 2.90482668 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 158 8.39e-48   NR HTQ09601.1 2682144 g76571 i0 79.8 4 84 17 100 0 252 1 30 113 HTQ09601.1 peptide-methionine (R)-S-oxide reductase MsrB [Fimbriimonadaceae bacterium] diamond 1008 158 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
32934064 32934064 PRJNA1233465f_S_NODE_228505_length_168_cov_1.554622_g226225_i0 PRJNA1233465 228505 168 1.554622 2.61176496 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 56.2 1.16e-7   NR HTQ09178.1 2682144 g226225 i0 75.8 2.25 33 8 58.9 0 164 66 77 109 HTQ09178.1 response regulator transcription factor [Fimbriimonadaceae bacterium] diamond 378 56.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
32950506 32950506 PRJNA1233465e_S_NODE_153290_length_164_cov_1.243478_g151980_i0 PRJNA1233465 153290 164 1.243478 2.03930392 Chthonomonadales bacterium 2282151 Bacteria Bacteria 55.1 4.97e-8   NR NLH99377.1 2282151 g151980 i0 51 0.932926829268293 51 24 91.5 1 162 13 32 82 NLH99377.1 antibiotic biosynthesis monooxygenase [Chthonomonadales bacterium] diamond 153 55.1 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
32950673 32950673 PRJNA1233465e_S_NODE_42370_length_276_cov_1.572687_g41060_i0 PRJNA1233465 42370 276 1.572687 4.34061612 Armatimonadota bacterium 2033014 Bacteria Bacteria 78.2 1.73e-14   NR MCS7235602.1 2033014 g41060 i0 45.7 2 92 49 98.9 1 2 274 258 349 MCS7235602.1 amidase [Armatimonadota bacterium] diamond 552 78.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32984732 32984732 PRJNA1233465e_S_NODE_22635_length_362_cov_2.223642_g21325_i0 PRJNA1233465 22635 362 2.223642 8.04958404 Chthonomonadales bacterium 2282151 Bacteria Bacteria 92 1.75e-19   NR HSV73416.1 2282151 g21325 i0 69.6 0.464088397790055 56 17 46.4 0 15 182 257 312 HSV73416.1 GDP-L-fucose synthase [Chthonomonadales bacterium] diamond 168 92 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
33009383 33009383 PRJNA1233465f_S_NODE_154371_length_198_cov_1.583893_g152091_i0 PRJNA1233465 154371 198 1.583893 3.13610814 PVC group 1783257 Bacteria Bacteria 77.8 9.25e-15   NR MBU0606703.1 2033014 g152091 i0 60.3 8.45454545454546 58 23 87.9 0 198 25 371 428 MBU0606703.1 hypothetical protein [Armatimonadota bacterium] diamond 1674 77.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33019378 33019378 PRJNA1233465f_S_NODE_19140_length_474_cov_6.449412_g16939_i0 PRJNA1233465 19140 474 6.449412 30.57021288 Fimbriimonas sp. 1936159 Bacteria Bacteria 98.2 2e-23   NR HWD40172.1 1936159 g16939 i0 60.3 0.430379746835443 68 27 43 0 1 204 26 93 HWD40172.1 Imm74 family immunity protein [Fimbriimonas sp.] diamond 204 98.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
33026316 33026316 PRJNA1233465d_S_NODE_23236_length_338_cov_1.692042_g22125_i0 PRJNA1233465 23236 338 1.692042 5.71910196 Bacteria 2 Bacteria Bacteria 117 8.359999999999999e-31   NR MBV6503421.1 2682145 g22125 i0 56.5 1.63313609467456 92 40 81.7 0 2 277 74 165 MBV6503421.1 hypothetical protein [Fimbriimonadales bacterium] diamond 552 117 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
33077663 33077663 PRJNA1233465f_S_NODE_49117_length_323_cov_2.412409_g46837_i0 PRJNA1233465 49117 323 2.412409 7.79208107 PVC group 1783257 Bacteria Bacteria 135 2.09e-36   NR WP_044949074.1 454171 g46837 i0 65.7 5.48916408668731 99 34 92 0 321 25 33 131 WP_044949074.1 SDR family oxidoreductase [Chthonomonas calidirosea] diamond 1773 136 0.992647058823529 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas calidirosea
33094245 33094245 PRJNA1233465a_S_NODE_215070_length_168_cov_1.285714_g213796_i0 PRJNA1233465 215070 168 1.285714 2.15999952 Bacteria 2 Bacteria Bacteria 87 7.92e-19   NR WP_044949074.1 454171 g213796 i0 75.9 4.85714285714286 54 13 96.4 0 5 166 52 105 WP_044949074.1 SDR family oxidoreductase [Chthonomonas calidirosea] diamond 816 87 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas calidirosea
33102363 33102363 PRJNA1233465a_S_NODE_207174_length_171_cov_0.852459_g205900_i0 PRJNA1233465 207174 171 0.852459 1.45770489 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 57.8 6.52e-8   NR MCC7229608.1 2682144 g205900 i0 73.5 2.2280701754386 34 9 59.6 0 104 3 259 292 MCC7229608.1 aldo/keto reductase [Fimbriimonadaceae bacterium] diamond 381 57.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
33137610 33137610 PRJNA1233465d_S_NODE_14591_length_411_cov_4.209945_g13481_i0 PRJNA1233465 14591 411 4.209945 17.30287395 Fimbriimonas sp. 1936159 Bacteria Bacteria 76.3 3.94e-15   NR HWD40172.1 1936159 g13481 i0 53.4 0.423357664233577 58 27 42.3 0 6 179 36 93 HWD40172.1 Imm74 family immunity protein [Fimbriimonas sp.] diamond 174 76.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
33137730 33137730 PRJNA1233465d_S_NODE_38711_length_271_cov_1.756757_g37600_i0 PRJNA1233465 38711 271 1.756757 4.76081147 Armatimonadota bacterium 2033014 Bacteria Bacteria 90.1 9.23e-19   NR MCS7235602.1 2033014 g37600 i0 48.9 0.996309963099631 90 46 99.6 0 271 2 295 384 MCS7235602.1 amidase [Armatimonadota bacterium] diamond 270 90.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33137911 33137911 PRJNA1233465d_S_NODE_76311_length_204_cov_1.025806_g75200_i0 PRJNA1233465 76311 204 1.025806 2.09264424 Fimbriimonas sp. 1936159 Bacteria Bacteria 77 1.63e-16   NR HWD40172.1 1936159 g75200 i0 81.4 0.632352941176471 43 8 63.2 0 131 3 1 43 HWD40172.1 Imm74 family immunity protein [Fimbriimonas sp.] diamond 129 77 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
33138935 33138935 PRJNA1233465f_S_NODE_229671_length_168_cov_1.084034_g227391_i0 PRJNA1233465 229671 168 1.084034 1.82117712 Armatimonadota bacterium 2033014 Bacteria Bacteria 92.8 1.07e-21   NR HCU35405.1 2033014 g227391 i0 67.9 3.78571428571429 53 17 94.6 0 8 166 138 190 HCU35405.1 response regulator [Armatimonadota bacterium] diamond 636 92.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33139149 33139149 PRJNA1233465f_S_NODE_49447_length_322_cov_2.820513_g47167_i0 PRJNA1233465 49447 322 2.820513 9.08205186 Chthonomonadales bacterium 2282151 Bacteria Bacteria 63.9 1.19e-10   NR NLH99377.1 2282151 g47167 i0 46.4 1.29503105590062 69 36 63.4 1 1 204 14 82 NLH99377.1 antibiotic biosynthesis monooxygenase [Chthonomonadales bacterium] diamond 417 63.9 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
33153273 33153273 PRJNA1233465a_S_NODE_112624_length_218_cov_61025.603550_g111350_i0 PRJNA1233465 112624 218 61025.60355 133035.815739 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 42.7 0.026   NR MCW5939630.1 2682144 g111350 i0 44.2 0.591743119266055 43 21 59.2 1 41 169 222 261 MCW5939630.1 succinylglutamate desuccinylase/aspartoacylase family protein [Fimbriimonadaceae bacterium] diamond 129 42.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
33153307 33153307 PRJNA1233465a_S_NODE_125160_length_210_cov_1.248447_g123886_i0 PRJNA1233465 125160 210 1.248447 2.6217387 Armatimonadetes bacterium RBG_16_67_12 1797288 Bacteria Bacteria 42 0.0411   NR OFX29318.1 1797288 g123886 i0 37 0.771428571428571 54 29 70 2 203 57 96 149 OFX29318.1 MAG: hypothetical protein A2Z07_09005 [Armatimonadetes bacterium RBG_16_67_12] diamond 162 42 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium RBG_16_67_12
33153788 33153788 PRJNA1233465a_S_NODE_82224_length_247_cov_1.232323_g80950_i0 PRJNA1233465 82224 247 1.232323 3.04383781 Armatimonadota bacterium 2033014 Bacteria Bacteria 122 3.84e-32   NR MFO8082381.1 2033014 g80950 i0 83.6 0.88663967611336 73 12 88.7 0 232 14 201 273 MFO8082381.1 GDP-mannose 4,6-dehydratase [Armatimonadota bacterium] diamond 219 122 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33155176 33155176 PRJNA1233465e_S_NODE_21208_length_372_cov_1.408669_g19899_i0 PRJNA1233465 21208 372 1.408669 5.24024868 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 100 1.28e-21   NR HZP81223.1 2739509 g19899 i0 44.1 3.90322580645161 118 65 95.2 1 371 18 319 435 HZP81223.1 choice-of-anchor tandem repeat GloVer-containing protein [Chthonomonadaceae bacterium] diamond 1452 100 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
33155384 33155384 PRJNA1233465e_S_NODE_6560_length_596_cov_2.738574_g5425_i0 PRJNA1233465 6560 596 2.738574 16.32190104 Fimbriimonas sp. 1936159 Bacteria Bacteria 97.1 1.92e-22   NR HWD40172.1 1936159 g5425 i0 59.7 0.337248322147651 67 27 33.7 0 594 394 27 93 HWD40172.1 Imm74 family immunity protein [Fimbriimonas sp.] diamond 201 97.1 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;