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contig_metadata

5 rows where bioproject = "PRJNA1233465" and tax_clade = "candidate division WS1"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • candidate division WS1 · 5 ✖

bioproject 1

  • PRJNA1233465 · 5 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32932568 32932568 PRJNA1233465b_S_NODE_81833_length_296_cov_1.979757_g80148_i0 PRJNA1233465 81833 296 1.979757 5.86008072 candidate division WS1 bacterium 2099669 Bacteria Bacteria 55.1 3.18e-6   NR NLO73505.1 2099669 g80148 i0 45.7 0.709459459459459 70 38 70.9 0 210 1 31 100 NLO73505.1 hypothetical protein [candidate division WS1 bacterium] diamond 210 55.1 1 Bacteria candidate division WS1 Bacillati           candidate division WS1 bacterium
32933087 32933087 PRJNA1233465d_S_NODE_88393_length_192_cov_1.062937_g87282_i0 PRJNA1233465 88393 192 1.062937 2.04083904 candidate division WS1 bacterium 2099669 Bacteria Bacteria 76.3 2.96e-14   NR NLO73505.1 2099669 g87282 i0 56.9 0.90625 58 25 90.6 0 13 186 517 574 NLO73505.1 hypothetical protein [candidate division WS1 bacterium] diamond 174 76.3 1 Bacteria candidate division WS1 Bacillati           candidate division WS1 bacterium
32950513 32950513 PRJNA1233465e_S_NODE_155970_length_163_cov_2.210526_g154660_i0 PRJNA1233465 155970 163 2.210526 3.60315738 candidate division WS1 bacterium 2099669 Bacteria Bacteria 79.3 1.59e-15   NR NLO73505.1 2099669 g154660 i0 61.1 0.993865030674847 54 21 99.4 0 2 163 531 584 NLO73505.1 hypothetical protein [candidate division WS1 bacterium] diamond 162 79.3 1 Bacteria candidate division WS1 Bacillati           candidate division WS1 bacterium
33019589 33019589 PRJNA1233465f_S_NODE_27964_length_407_cov_2.120112_g25702_i0 PRJNA1233465 27964 407 2.120112 8.62885584 candidate division WS1 bacterium 2099669 Bacteria Bacteria 103 1.09e-22   NR NLO73505.1 2099669 g25702 i0 54.9 0.604422604422604 82 37 60.4 0 5 250 507 588 NLO73505.1 hypothetical protein [candidate division WS1 bacterium] diamond 246 103 1 Bacteria candidate division WS1 Bacillati           candidate division WS1 bacterium
33067975 33067975 PRJNA1233465a_S_NODE_136485_length_203_cov_1.129870_g135211_i0 PRJNA1233465 136485 203 1.12987 2.2936361 candidate division WS1 bacterium 2099669 Bacteria Bacteria 44.7 0.00461   NR NLO73505.1 2099669 g135211 i0 45 0.886699507389163 60 33 88.7 0 182 3 31 90 NLO73505.1 hypothetical protein [candidate division WS1 bacterium] diamond 180 44.7 1 Bacteria candidate division WS1 Bacillati           candidate division WS1 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;