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contig_metadata

32 rows where bioproject = "PRJNA1233465" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 32 ✖

bioproject 1

  • PRJNA1233465 · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25559797 25559797 PRJNA1233465f_S_NODE_56857_length_303_cov_4.948819_g54577_i0 PRJNA1233465 56857 303 4.948819 14.99492157 Halogeometricum borinquense 60847 Archaea Archaea 58.4 6.07e-4   NTclustered gi|1810666233|gb|CP048739.1| 60847 g54577 i0 97.059 1.36303630363036 34 1 11 0 141 174 812697 812730 Halogeometricum borinquense strain wsp4 chromosome, complete genome blastn 413 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halogeometricum Halogeometricum borinquense
25672497 25672497 PRJNA1233465b_S_NODE_123122_length_254_cov_61.921951_g121437_i0 PRJNA1233465 123122 254 61.921951 157.28175554 Methanosalsum zhilinae DSM 4 39669 Archaea Archaea 56.5 0.002   NTclustered gi|335929340|gb|CP002101.1| 679901 g121437 i0 100 0.118110236220472 30 0 12 0 99 128 1665167 1665138 Methanosalsum zhilinae DSM 4017, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosalsum Methanosalsum zhilinae
25685121 25685121 PRJNA1233465e_S_NODE_45618_length_267_cov_4.605505_g44308_i0 PRJNA1233465 45618 267 4.605505 12.29669835 Methanosalsum zhilinae DSM 4 39669 Archaea Archaea 56.5 0.002   NTclustered gi|335929340|gb|CP002101.1| 679901 g44308 i0 100 0.112359550561798 30 0 11 0 116 145 1665167 1665138 Methanosalsum zhilinae DSM 4017, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosalsum Methanosalsum zhilinae
25687658 25687658 PRJNA1233465f_S_NODE_110914_length_228_cov_6.770950_g108634_i0 PRJNA1233465 110914 228 6.77095 15.437766 Methanosalsum zhilinae DSM 4 39669 Archaea Archaea 56.5 0.002   NTclustered gi|335929340|gb|CP002101.1| 679901 g108634 i0 100 0.131578947368421 30 0 13 0 88 117 1665167 1665138 Methanosalsum zhilinae DSM 4017, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosalsum Methanosalsum zhilinae
25810342 25810342 PRJNA1233465b_S_NODE_250635_length_190_cov_1.085106_g248950_i0 PRJNA1233465 250635 190 1.085106 2.0617014 Halobacterium sp. DL1 751944 Archaea Archaea 145 2.6199999999999997e-30   NTclustered gi|573484043|gb|CP007060.1| 751944 g248950 i0 88.889 72.9473684210526 117 13 64 0 72 188 1487658 1487774 Halobacterium sp. DL1, complete genome blastn 13860 145 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium sp. DL1
25811721 25811721 PRJNA1233465b_S_NODE_362963_length_162_cov_1.504425_g361278_i0 PRJNA1233465 362963 162 1.504425 2.4371685 Salinirubellus salinus 1364945 Archaea Archaea 71.3 3.72e-8   NTclustered gi|2297614754|gb|CP104003.1| 1364945 g361278 i0 100 1.03086419753086 38 0 23 0 36 73 2448714 2448751 Salinirubellus salinus strain ZS-35-S2 chromosome, complete genome blastn 167 71.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Salinirubellus Salinirubellus salinus
25821098 25821098 PRJNA1233465e_S_NODE_39331_length_285_cov_1.266949_g38021_i0 PRJNA1233465 39331 285 1.266949 3.61080465 Halogeometricum borinquense 60847 Archaea Archaea 58.4 5.66e-4   NTclustered gi|1810666233|gb|CP048739.1| 60847 g38021 i0 97.059 1.44912280701754 34 1 12 0 30 63 812730 812697 Halogeometricum borinquense strain wsp4 chromosome, complete genome blastn 413 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halogeometricum Halogeometricum borinquense
25946122 25946122 PRJNA1233465b_S_NODE_217412_length_202_cov_1.333333_g215727_i0 PRJNA1233465 217412 202 1.333333 2.69333266 Halapricum desulfuricans 2841257 Archaea Archaea 54.7 0.005   NTclustered gi|1995635729|gb|CP064789.1| 2841257 g215727 i0 96.97 0.326732673267327 33 0 16 1 7 38 2787879 2787911 Halapricum desulfuricans strain HSR-Bgl chromosome, complete genome blastn 66 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halapricum Halapricum desulfuricans
25952625 25952625 PRJNA1233465d_S_NODE_64484_length_218_cov_2.426036_g63373_i0 PRJNA1233465 64484 218 2.426036 5.28875848 Methanosalsum zhilinae DSM 4 39669 Archaea Archaea 56.5 0.001   NTclustered gi|335929340|gb|CP002101.1| 679901 g63373 i0 100 0.137614678899083 30 0 14 0 106 135 1665138 1665167 Methanosalsum zhilinae DSM 4017, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosalsum Methanosalsum zhilinae
26102444 26102444 PRJNA1233465f_S_NODE_258733_length_162_cov_2.973451_g256453_i0 PRJNA1233465 258733 162 2.973451 4.81699062 uncultured Methanospirillum sp. 262503 Archaea Archaea 99 1.71e-16   NTclustered gi|2621706206|emb|OY764544.1| 262503 g256453 i0 85.87 1.16049382716049 92 13 57 0 18 109 1042088 1041997 MAG: uncultured Methanospirillum sp. isolate ae1c6b73-8e60-4006-a0f9-e2019dc13642 genome assembly, chromosome: 1 blastn 188 99 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum uncultured Methanospirillum sp.
26227697 26227697 PRJNA1233465e_S_NODE_140798_length_168_cov_0.907563_g139488_i0 PRJNA1233465 140798 168 0.907563 1.52470584 Methanothrix sp. 90426 Archaea Archaea 52.8 0.014   NTclustered gi|2133325659|gb|CP086218.1| 90426 g139488 i0 100 0.166666666666667 28 0 17 0 75 102 336622 336595 MAG: Methanothrix sp. isolate MAG 280 chromosome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
26351885 26351885 PRJNA1233465a_S_NODE_74591_length_255_cov_26.873786_g73317_i0 PRJNA1233465 74591 255 26.873786 68.5281543 Methanosalsum zhilinae DSM 4 39669 Archaea Archaea 56.5 0.002   NTclustered gi|335929340|gb|CP002101.1| 679901 g73317 i0 100 0.117647058823529 30 0 12 0 127 156 1665138 1665167 Methanosalsum zhilinae DSM 4017, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosalsum Methanosalsum zhilinae
26494104 26494104 PRJNA1233465d_S_NODE_116896_length_171_cov_1.852459_g115785_i0 PRJNA1233465 116896 171 1.852459 3.16770489 Halogeometricum borinquense 60847 Archaea Archaea 58.4 3.08e-4   NTclustered gi|1810666233|gb|CP048739.1| 60847 g115785 i0 97.059 0.39766081871345 34 1 20 0 96 129 812730 812697 Halogeometricum borinquense strain wsp4 chromosome, complete genome blastn 68 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halogeometricum Halogeometricum borinquense
32916371 32916371 PRJNA1233465e_S_NODE_49657_length_258_cov_1.837321_g48347_i0 PRJNA1233465 49657 258 1.837321 4.74028818 Halosolutus halophilus 1552990 Archaea Archaea 68.2 4.11e-11   NR WP_265111444.1 1552990 g48347 i0 44.3 0.918604651162791 79 44 91.9 0 249 13 1 79 WP_265111444.1 DUF2332 domain-containing protein [Halosolutus halophilus] diamond 237 68.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halosolutus Halosolutus halophilus
32917258 32917258 PRJNA1233465f_S_NODE_75889_length_268_cov_4.150685_g73609_i0 PRJNA1233465 75889 268 4.150685 11.1238358 Halosolutus halophilus 1552990 Archaea Archaea 62.8 3.79e-9   NR WP_265111444.1 1552990 g73609 i0 43.2 1.74626865671642 74 42 82.8 0 42 263 1 74 WP_265111444.1 DUF2332 domain-containing protein [Halosolutus halophilus] diamond 468 62.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halosolutus Halosolutus halophilus
32940742 32940742 PRJNA1233465b_S_NODE_262377_length_186_cov_1.335766_g260692_i0 PRJNA1233465 262377 186 1.335766 2.48452476 root 1 Root_unresolved Root_unresolved 64.3 4.14e-10   NR PSQ45340.1 1919201 g260692 i0 57.4 13.9354838709677 54 23 87.1 0 185 24 209 262 PSQ45340.1 MAG: serpin family protein [Halobacteriales archaeon SW_6_65_15] diamond 2592 64.7 0.993817619783617 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon SW_6_65_15
32949388 32949388 PRJNA1233465b_S_NODE_203994_length_207_cov_3.297468_g202309_i0 PRJNA1233465 203994 207 3.297468 6.82575876 Candidatus Methanophagaceae archaeon 3386247 Archaea Archaea 107 3.19e-25   NR KAF5437612.1 3386247 g202309 i0 68.7 1.92753623188406 67 21 97.1 0 5 205 73 139 KAF5437612.1 phenylacetate-CoA ligase [Candidatus Methanophagaceae archaeon] diamond 399 107 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales Candidatus Methanophagaceae   Candidatus Methanophagaceae archaeon
32967010 32967010 PRJNA1233465b_S_NODE_97890_length_277_cov_3.219298_g96205_i0 PRJNA1233465 97890 277 3.219298 8.91745546 Halococcus saccharolyticus 62319 Archaea Archaea 127 6.49e-34   NR WP_006078685.1 62319 g96205 i0 82.9 0.823104693140794 76 13 82.3 0 272 45 210 285 WP_006078685.1 protein translocase subunit SecF [Halococcus saccharolyticus] diamond 228 127 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus saccharolyticus
32985779 32985779 PRJNA1233465f_S_NODE_68155_length_281_cov_1.387931_g65875_i0 PRJNA1233465 68155 281 1.387931 3.90008611 Haloarculaceae archaeon 2497615 Archaea Archaea 44.7 0.0106   NR MFB6164585.1 2497615 g65875 i0 40.3 0.661921708185053 62 36 65.1 1 184 2 176 237 MFB6164585.1 SDR family NAD(P)-dependent oxidoreductase [Haloarculaceae archaeon] diamond 186 44.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae   Haloarculaceae archaeon
32985871 32985871 PRJNA1233465f_S_NODE_89659_length_250_cov_1.965174_g87379_i0 PRJNA1233465 89659 250 1.965174 4.912935 Halorubrum ezzemoulense 337243 Archaea Archaea 65.9 4.83e-12   NR WP_271963845.1 337243 g87379 i0 100 0.456 38 0 45.6 0 135 248 1 38 WP_271963845.1 hypothetical protein [Halorubrum ezzemoulense] diamond 114 65.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum ezzemoulense
33001765 33001765 PRJNA1233465e_S_NODE_17987_length_399_cov_2.034286_g16683_i0 PRJNA1233465 17987 399 2.034286 8.11680114 Halorubrum ezzemoulense 337243 Archaea Archaea 129 2.61e-36   NR WP_271963845.1 337243 g16683 i0 100 0.571428571428571 76 0 57.1 0 372 145 1 76 WP_271963845.1 hypothetical protein [Halorubrum ezzemoulense] diamond 228 129 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum ezzemoulense
33009143 33009143 PRJNA1233465d_S_NODE_40795_length_265_cov_1.347222_g39684_i0 PRJNA1233465 40795 265 1.347222 3.5701383 root 1 Root_unresolved Root_unresolved 123 1.71e-32   NR HET8686083.1 2213 g39684 i0 67.8 6.80377358490566 87 28 98.5 0 262 2 149 235 HET8686083.1 glycosyltransferase family 2 protein [Methanosarcina sp.] diamond 1803 124 0.991935483870968 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
33016850 33016850 PRJNA1233465a_S_NODE_117364_length_215_cov_1.740964_g116090_i0 PRJNA1233465 117364 215 1.740964 3.7430726 Methanosarcinales archaeon 2250255 Archaea Archaea 97.4 1.2e-21   NR TRZ87064.1 2250255 g116090 i0 66.7 2.90232558139535 69 23 96.3 0 207 1 312 380 TRZ87064.1 MAG: hypothetical protein D4R88_09905, partial [Methanosarcinales archaeon] diamond 624 97.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
33017213 33017213 PRJNA1233465a_S_NODE_25316_length_377_cov_1.850610_g24043_i0 PRJNA1233465 25316 377 1.85061 6.9767997 Methanooceanicella nereidis 2052831 Archaea Archaea 52.4 3.33e-5   NR WP_230743097.1 2052831 g24043 i0 33.9 1.81432360742706 62 41 49.3 0 7 192 137 198 WP_230743097.1 amino acid kinase [Methanooceanicella nereidis] diamond 684 52.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanooceanicella Methanooceanicella nereidis
33033870 33033870 PRJNA1233465a_S_NODE_102780_length_227_cov_0.831461_g101506_i0 PRJNA1233465 102780 227 0.831461 1.88741647 Methanothrix sp. 90426 Archaea Archaea 47.4 7.04e-4   NR TFH47918.1 90426 g101506 i0 42.9 1.4273127753304 56 27 67.4 1 193 41 192 247 TFH47918.1 MAG: hypothetical protein E4G89_07140 [Methanothrix sp.] diamond 324 47.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
33051220 33051220 PRJNA1233465a_S_NODE_242157_length_162_cov_1.451327_g240883_i0 PRJNA1233465 242157 162 1.451327 2.35114974 Methanogenium sp. 2196 Archaea Archaea 63.5 2.23e-10   NR MFA5398672.1 2196 g240883 i0 55.4 1.03703703703704 56 18 98.1 2 2 160 171 222 MFA5398672.1 radical SAM/SPASM domain-containing protein [Methanogenium sp.] diamond 168 63.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium sp.
33067952 33067952 PRJNA1233465a_S_NODE_128005_length_208_cov_1.490566_g126731_i0 PRJNA1233465 128005 208 1.490566 3.10037728 Halosimplex rarum 3396619 Archaea Archaea 58.9 4.66e-8   NR WP_415383016.1 3396619 g126731 i0 36.2 4.99038461538461 69 43 99.5 1 208 2 51 118 WP_415383016.1 homing endonuclease associated repeat-containing protein [Halosimplex sp. TS25] diamond 1038 58.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex rarum
33068463 33068463 PRJNA1233465a_S_NODE_91933_length_237_cov_1.047872_g90659_i0 PRJNA1233465 91933 237 1.047872 2.48345664 Methanofollis formosanus 299308 Archaea Archaea 42.4 0.0467   NR WP_220681777.1 299308 g90659 i0 39.3 0.708860759493671 56 29 70.9 1 7 174 307 357 WP_220681777.1 hypothetical protein [Methanofollis formosanus] diamond 168 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanofollis Methanofollis formosanus
33069244 33069244 PRJNA1233465d_S_NODE_14117_length_417_cov_1.698370_g13008_i0 PRJNA1233465 14117 417 1.69837 7.0822029 Halorubrum ezzemoulense 337243 Archaea Archaea 129 2.3e-36   NR WP_271963845.1 337243 g13008 i0 100 0.546762589928058 76 0 54.7 0 321 94 1 76 WP_271963845.1 hypothetical protein [Halorubrum ezzemoulense] diamond 228 129 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum ezzemoulense
33145966 33145966 PRJNA1233465f_S_NODE_276367_length_155_cov_3.745283_g274087_i0 PRJNA1233465 276367 155 3.745283 5.80518865 root 1 Root_unresolved Root_unresolved 58.5 2.96e-8   NR WP_245249304.1 547055 g274087 i0 54.2 5.55483870967742 48 22 92.9 0 11 154 274 321 WP_245249304.1 chemotaxis protein CheB [Methanolinea mesophila] diamond 861 58.9 0.99320882852292 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanolinea Methanolinea mesophila
33155199 33155199 PRJNA1233465e_S_NODE_25592_length_343_cov_2.193878_g24282_i0 PRJNA1233465 25592 343 2.193878 7.52500154 Methanogenium sp. 2196 Archaea Archaea 58.5 3.18e-7   NR MFA5395708.1 2196 g24282 i0 31 1.01457725947522 116 73 99.7 4 343 2 74 184 MFA5395708.1 hypothetical protein [Methanogenium sp.] diamond 348 58.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium sp.
33156095 33156095 PRJNA1233465f_S_NODE_51400_length_317_cov_1.220149_g49120_i0 PRJNA1233465 51400 317 1.220149 3.86787233 Methanolobus sp. 1874737 Archaea Archaea 73.9 1.32e-14   NR MDY0386964.1 1874737 g49120 i0 62.1 0.548895899053628 58 22 54.9 0 174 1 24 81 MDY0386964.1 hypothetical protein [Methanolobus sp.] diamond 174 73.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;