RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1233465", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1233465 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32941165 32941165 PRJNA1233465f_S_NODE_277585_length_154_cov_3.723810_g275305_i0 PRJNA1233465 277585 154 3.72381 5.7346674 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.4 6.62e-7   NR KAF4660660.1 32597 g275305 i0 71.9 8.31818181818182 32 9 62.3 0 152 57 53 84 KAF4660660.1 60S ribosomal protein L31 [Perkinsus olseni] diamond 1281 52.8 0.992424242424242 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32983788 32983788 PRJNA1233465b_S_NODE_326739_length_168_cov_1.285714_g325054_i0 PRJNA1233465 326739 168 1.285714 2.15999952 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.0195   NR KAF4650831.1 32597 g325054 i0 34.1 2.35714285714286 44 29 78.6 0 1 132 1519 1562 KAF4650831.1 hypothetical protein FOL46_000698 [Perkinsus olseni] diamond 396 42.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;