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contig_metadata

11 rows where bioproject = "PRJNA1233465", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 11 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 11 ✖

bioproject 1

  • PRJNA1233465 · 11 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32923870 32923870 PRJNA1233465f_S_NODE_189369_length_182_cov_1.135338_g187089_i0 PRJNA1233465 189369 182 1.135338 2.06631516 Bacteria 2 Bacteria Bacteria 119 2.45e-29   NR OGW98185.1 1801839 g187089 i0 90 5.93406593406593 60 6 98.9 0 2 181 191 250 OGW98185.1 MAG: glutamate synthase subunit alpha [Omnitrophica WOR_2 bacterium GWA2_45_18] diamond 1080 120 0.991666666666667 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica WOR_2 bacterium GWA2_45_18
33008837 33008837 PRJNA1233465a_S_NODE_166195_length_187_cov_2.043478_g164921_i0 PRJNA1233465 166195 187 2.043478 3.82130386 PVC group 1783257 Bacteria Bacteria 41.6 0.0457   NR MBD3378838.1 2035772 g164921 i0 36.7 1.7807486631016 49 31 78.6 0 180 34 139 187 MBD3378838.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 333 42 0.990476190476191 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
33042933 33042933 PRJNA1233465a_S_NODE_144820_length_198_cov_1.550336_g143546_i0 PRJNA1233465 144820 198 1.550336 3.06966528 Pseudomonadati 3379134 Bacteria Bacteria 90.9 1.41e-20   NR MBI3320648.1 2035772 g143546 i0 66.2 1.96969696969697 65 21 98.5 1 196 2 113 176 MBI3320648.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 390 91.7 0.991275899672846 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
33067997 33067997 PRJNA1233465a_S_NODE_144317_length_198_cov_2.456376_g143043_i0 PRJNA1233465 144317 198 2.456376 4.86362448 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 53.5 3.12e-6   NR MFH1800568.1 2035772 g143043 i0 63.2 0.575757575757576 38 11 57.6 1 197 84 446 480 MFH1800568.1 leucyl aminopeptidase [Candidatus Omnitrophota bacterium] diamond 114 53.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
33085781 33085781 PRJNA1233465b_S_NODE_181606_length_218_cov_1.230769_g179921_i0 PRJNA1233465 181606 218 1.230769 2.68307642 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.7 0.0072   NR HOW35028.1 2035772 g179921 i0 43.5 1.3348623853211 46 26 63.3 0 214 77 54 99 HOW35028.1 cupin domain-containing protein [Candidatus Omnitrophota bacterium] diamond 291 42.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
33103223 33103223 PRJNA1233465b_S_NODE_50558_length_350_cov_6.930233_g48873_i0 PRJNA1233465 50558 350 6.930233 24.2558155 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 108 3.97e-25   NR MBI4549771.1 2035772 g48873 i0 77.3 0.565714285714286 66 15 56.6 0 199 2 1 66 MBI4549771.1 radical SAM protein [Candidatus Omnitrophota bacterium] diamond 198 108 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
33104074 33104074 PRJNA1233465e_S_NODE_167246_length_160_cov_3.801802_g165936_i0 PRJNA1233465 167246 160 3.801802 6.0828832 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 45.4 4.38e-4   NR MCB9757916.1 2035772 g165936 i0 38 1.7625 50 31 93.8 0 1 150 60 109 MCB9757916.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 282 45.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
33111506 33111506 PRJNA1233465e_S_NODE_141614_length_167_cov_1.737288_g140304_i0 PRJNA1233465 141614 167 1.737288 2.90127096 Bacteria 2 Bacteria Bacteria 90.5 1.01e-19   NR OGX37540.1 1801858 g140304 i0 90 13.4550898203593 50 5 89.8 0 17 166 77 126 OGX37540.1 MAG: ATPase [Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_52_10] diamond 2247 90.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_52_10
33120480 33120480 PRJNA1233465d_S_NODE_142583_length_162_cov_0.884956_g141472_i0 PRJNA1233465 142583 162 0.884956 1.43362872 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 39.7 0.0187   NR MBU4376358.1 2035772 g141472 i0 45.5 0.611111111111111 33 18 61.1 0 157 59 7 39 MBU4376358.1 50S ribosomal protein L33 [Candidatus Omnitrophota bacterium] diamond 99 39.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
33155720 33155720 PRJNA1233465f_S_NODE_16576_length_502_cov_2.801325_g14417_i0 PRJNA1233465 16576 502 2.801325 14.0626515 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 73.9 1.68e-13   NR MCB9757916.1 2035772 g14417 i0 36.6 0.669322709163347 112 68 66.9 1 115 450 1 109 MCB9757916.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 336 73.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
33173122 33173122 PRJNA1233465f_S_NODE_221696_length_170_cov_2.016529_g219416_i0 PRJNA1233465 221696 170 2.016529 3.4280993 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 77.8 2.73e-16   NR MBL8012205.1 2035772 g219416 i0 70 0.882352941176471 50 15 88.2 0 1 150 69 118 MBL8012205.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 150 77.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;