RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1233465", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA1233465 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32923660 32923660 PRJNA1233465d_S_NODE_63841_length_219_cov_2.158824_g62730_i0 PRJNA1233465 63841 219 2.158824 4.72782456 Bacteria 2 Bacteria Bacteria 75.1 7.21e-14   NR MDB4125657.1 2026760 g62730 i0 51.7 4.41095890410959 58 28 79.5 0 41 214 264 321 MDB4125657.1 cyclopropane-fatty-acyl-phospholipid synthase family protein [Fidelibacterota bacterium] diamond 966 75.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32923838 32923838 PRJNA1233465f_S_NODE_121505_length_219_cov_4.805882_g119225_i0 PRJNA1233465 121505 219 4.805882 10.52488158 Bacteria 2 Bacteria Bacteria 75.1 7.21e-14   NR MDB4125657.1 2026760 g119225 i0 51.7 4.41095890410959 58 28 79.5 0 41 214 264 321 MDB4125657.1 cyclopropane-fatty-acyl-phospholipid synthase family protein [Fidelibacterota bacterium] diamond 966 75.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
33034573 33034573 PRJNA1233465b_S_NODE_168596_length_225_cov_1.113636_g166911_i0 PRJNA1233465 168596 225 1.113636 2.505681 Fidelibacterota bacterium 2026760 Bacteria Bacteria 41.2 0.0402   NR MBC8197952.1 2026760 g166911 i0 33.8 0.906666666666667 68 33 90.7 2 10 213 59 114 MBC8197952.1 hypothetical protein [Fidelibacterota bacterium] diamond 204 41.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
33070547 33070547 PRJNA1233465f_S_NODE_211781_length_174_cov_0.728000_g209501_i0 PRJNA1233465 211781 174 0.728 1.26672 Fidelibacterota bacterium 2026760 Bacteria Bacteria 40.4 0.041   NR MFQ6614806.1 2026760 g209501 i0 61.5 1.31034482758621 39 12 62.1 1 173 66 6 44 MFQ6614806.1 ATP-binding protein [Fidelibacterota bacterium] diamond 228 40.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;