RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1233465", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA1233465 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33051907 33051907 PRJNA1233465b_S_NODE_341829_length_165_cov_2.586207_g340144_i0 PRJNA1233465 341829 165 2.586207 4.26724155 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 45.4 0.00141   NR MFP4543325.1 2447898 g340144 i0 48.1 0.945454545454545 52 23 94.5 2 164 9 73 120 MFP4543325.1 GDP-mannose 4,6-dehydratase [Candidatus Kapaibacterium sp.] diamond 156 45.4 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
33102814 33102814 PRJNA1233465b_S_NODE_167662_length_225_cov_2.176136_g165977_i0 PRJNA1233465 167662 225 2.176136 4.896306 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 72.4 9.1e-13   NR MBN8573717.1 2447898 g165977 i0 53.7 0.893333333333333 67 31 89.3 0 202 2 54 120 MBN8573717.1 glycosyltransferase family 4 protein [Candidatus Kapaibacterium sp.] diamond 201 72.4 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
33172233 33172233 PRJNA1233465e_S_NODE_110920_length_185_cov_1.000000_g109610_i0 PRJNA1233465 110920 185 1 1.85 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 64.7 2.73e-10   NR TAE27385.1 2447898 g109610 i0 78 1.32972972972973 41 7 66.5 1 124 2 92 130 TAE27385.1 MAG: cytochrome-c peroxidase [Candidatus Kapaibacterium sp.] diamond 246 64.7 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;