RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA1233317" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1233317 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4162686 4162686 PRJNA1233317_S_NODE_5084_length_317_cov_4.713178_g5048_i0 PRJNA1233317 5084 317 4.713178 14.94077426 Malassezia restricta 76775 Fungi Fungi 231 3.55e-56   NTclustered gi|1546630899|ref|XM_027627110.1| 76775 g5048 i0 100 0.394321766561514 125 0 39 0 193 317 1965 1841 Malassezia restricta ATP-dependent RNA helicase DDX3X (MRET_0483), partial mRNA blastn 125 231 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
11250508 11250508 PRJNA1233317_S_NODE_5509_length_309_cov_4.520000_g5473_i0 PRJNA1233317 5509 309 4.52 13.9668 Malassezia 55193 Fungi Fungi 571 1.7899999999999995e-158   NTclustered gi|1321659599|gb|KY911093.1| 76775 g5473 i0 100 79.1844660194175 309 0 100 0 1 309 2492 2184 Malassezia restricta mitochondrion, complete genome blastn 24468 571 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
16912766 16912766 PRJNA1233317_S_NODE_7454_length_280_cov_3.398190_g7418_i0 PRJNA1233317 7454 280 3.39819 9.514932 Rhodotorula graminis 29898 Fungi Fungi 342 1.3699999999999997e-89   NTclustered gi|1069933827|ref|XM_018411978.1| 578459 g7418 i0 88.889 55.7714285714286 279 29 99 2 3 280 455 178 Rhodotorula graminis WP1 60S ribosomal protein L12 (RHOBADRAFT_10053), partial mRNA blastn 15616 342 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula graminis
21448992 21448992 PRJNA1233317_S_NODE_15957_length_192_cov_2.466165_g15921_i0 PRJNA1233317 15957 192 2.466165 4.7350368 Malassezia 55193 Fungi Fungi 355 1.13e-93   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g15921 i0 100 103.875 192 0 100 0 1 192 2619 2428 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 19944 355 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
23999216 23999216 PRJNA1233317_S_NODE_1299_length_431_cov_3.827957_g1263_i0 PRJNA1233317 1299 431 3.827957 16.49849467 Malassezia 55193 Fungi Fungi 791 0   NTclustered gi|1321659599|gb|KY911093.1| 76775 g1263 i0 99.768 45.2134570765661 431 1 100 0 1 431 31678 32108 Malassezia restricta mitochondrion, complete genome blastn 19487 791 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
23999234 23999234 PRJNA1233317_S_NODE_2819_length_366_cov_3.899023_g2783_i0 PRJNA1233317 2819 366 3.899023 14.27042418 Malassezia 55193 Fungi Fungi 665 0   NTclustered gi|1321659621|gb|KY911094.1| 76775 g2783 i0 99.454 83.7459016393443 366 2 100 0 1 366 1954 1589 Malassezia restricta mitochondrion, complete genome blastn 30651 665 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
30767906 30767906 PRJNA1233317_S_NODE_3734_length_343_cov_3.577465_g3698_i0 PRJNA1233317 3734 343 3.577465 12.27070495 Cryptococcus neoformans var. grubii c45 5207 Fungi Fungi 43.9 0.0434   NR OWZ39700.1 1230068 g3698 i0 29.9 0.760932944606414 87 52 68.2 2 12 245 262 348 OWZ39700.1 hypothetical protein C356_03960 [Cryptococcus neoformans var. grubii c45] diamond 261 43.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus neoformans
31368585 31368585 PRJNA1233317_S_NODE_16196_length_190_cov_3.702290_g16160_i0 PRJNA1233317 16196 190 3.70229 7.034351 Malassezia arunalokei 1514897 Fungi Fungi 62.4 2.21e-9   NR WFD16437.1 1514897 g16160 i0 61.3 0.978947368421053 62 12 78.9 1 190 41 938 999 WFD16437.1 hypothetical protein MARU1_002474 [Malassezia arunalokei] diamond 186 62.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia arunalokei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;