RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1233317", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1233317 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27565254 27565254 PRJNA1233317_S_NODE_14324_length_203_cov_2.118056_g14288_i0 PRJNA1233317 14324 203 2.118056 4.29965368 Eurotatoria 2816136 Rotifera other_Eukaryota 55.5 1.92e-7   NR CAF0964094.1 433720 g14288 i0 45.6 1.92118226600985 68 36 99 1 202 2 48 115 CAF0964094.1 unnamed protein product [Adineta steineri] diamond 390 55.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
30009737 30009737 PRJNA1233317_S_NODE_8271_length_268_cov_4.377990_g8235_i0 PRJNA1233317 8271 268 4.37799 11.7330132 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 46.2 0.00261   NR CAF1103234.1 1234261 g8235 i0 36.2 0.649253731343284 58 29 64.9 1 261 88 202 251 CAF1103234.1 unnamed protein product [Didymodactylos carnosus] diamond 174 46.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;