contig_metadata
137 rows where bioproject = "PRJNA1228616" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 335575 | 335575 | PRJNA1228616_S_NODE_3041_length_227_cov_2.173913_g3018_i0 | PRJNA1228616 | 3041 | 227 | 2.173913 | 4.93478251 | Mus musculus | 10090 | Chordata | Chordata | 420 | 4.81e-113 | NTclustered | gi|1395168470|ref|NM_011662.3| | 10090 | g3018 | i0 | 100 | 41.7885462555066 | 227 | 0 | 100 | 0 | 1 | 227 | 217 | 443 | Mus musculus TYRO protein tyrosine kinase binding protein (Tyrobp), mRNA | blastn | 9486 | 420 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 335576 | 335576 | PRJNA1228616_S_NODE_5121_length_185_cov_1.866197_g5098_i0 | PRJNA1228616 | 5121 | 185 | 1.866197 | 3.45246445 | Mus musculus | 10090 | Chordata | Chordata | 342 | 8.369999999999999e-90 | NTclustered | gi|74195232|dbj|AK148104.1| | 10090 | g5098 | i0 | 100 | 9.87567567567568 | 185 | 0 | 100 | 0 | 1 | 185 | 1561 | 1745 | Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370017M10 product:legumain, full insert sequence | blastn | 1827 | 342 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 335578 | 335578 | PRJNA1228616_S_NODE_5381_length_182_cov_1.352518_g5358_i0 | PRJNA1228616 | 5381 | 182 | 1.352518 | 2.46158276 | Rattus norvegicus | 10116 | Chordata | Chordata | 337 | 3.82e-88 | NTclustered | gi|57164014|ref|NM_001009541.1| | 10116 | g5358 | i0 | 100 | 15.4505494505495 | 182 | 0 | 100 | 0 | 1 | 182 | 1420 | 1239 | Rattus norvegicus immediate early response 2 (Ier2), mRNA | blastn | 2812 | 337 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 335581 | 335581 | PRJNA1228616_S_NODE_6561_length_168_cov_2.568000_g6538_i0 | PRJNA1228616 | 6561 | 168 | 2.568 | 4.31424 | Mus musculus | 10090 | Chordata | Chordata | 311 | 2.11e-80 | NTclustered | gi|186967918|gb|EU433313.1| | 10090 | g6538 | i0 | 100 | 74.6428571428571 | 168 | 0 | 100 | 0 | 1 | 168 | 487 | 654 | Mus musculus isolate vrDNA-6B external transcribed spacer, partial sequence | blastn | 12540 | 311 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 335583 | 335583 | PRJNA1228616_S_NODE_8001_length_156_cov_1.849558_g7978_i0 | PRJNA1228616 | 8001 | 156 | 1.849558 | 2.88531048 | Rattus norvegicus | 10116 | Chordata | Chordata | 272 | 9.059999999999999e-69 | NTclustered | gi|2189177509|ref|NM_001401203.1| | 10116 | g7978 | i0 | 98.077 | 3 | 156 | 3 | 100 | 0 | 1 | 156 | 1550 | 1395 | Rattus norvegicus cartilage associated protein (Crtap), transcript variant 1, mRNA | blastn | 468 | 272 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1047091 | 1047091 | PRJNA1228616_S_NODE_2541_length_244_cov_2.507463_g2518_i0 | PRJNA1228616 | 2541 | 244 | 2.507463 | 6.11820972 | Bos | 9903 | Chordata | Chordata | 451 | 1.86e-122 | NTclustered | gi|66792835|ref|NM_001024523.1| | 9913 | g2518 | i0 | 100 | 19.7991803278689 | 244 | 0 | 100 | 0 | 1 | 244 | 472 | 715 | Bos taurus G protein subunit gamma 11 (GNG11), mRNA | blastn | 4831 | 451 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 1047093 | 1047093 | PRJNA1228616_S_NODE_5841_length_176_cov_2.105263_g5818_i0 | PRJNA1228616 | 5841 | 176 | 2.105263 | 3.70526288 | root | 1 | Root_unresolved | Root_unresolved | 320 | 3.69e-83 | NTclustered | gi|2587618042|ref|XR_009493711.1| | 9913 | g5818 | i0 | 99.432 | 15.1875 | 176 | 1 | 100 | 0 | 1 | 176 | 3119 | 3294 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344761), ncRNA | blastn | 2673 | 322 | 0.993788819875776 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 1047094 | 1047094 | PRJNA1228616_S_NODE_6721_length_167_cov_1.112903_g6698_i0 | PRJNA1228616 | 6721 | 167 | 1.112903 | 1.85854801 | Bos | 9903 | Chordata | Chordata | 93.5 | 8.25e-15 | NTclustered | gi|2633727009|ref|XM_061439170.1| | 9906 | g6698 | i0 | 98.148 | 172.766467065868 | 54 | 0 | 32 | 1 | 1 | 53 | 5005 | 4952 | PREDICTED: Bos javanicus zinc finger protein, FOG family member 2 (ZFPM2), transcript variant X7, mRNA | blastn | 28852 | 93.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 1047095 | 1047095 | PRJNA1228616_S_NODE_8901_length_150_cov_2.271028_g8878_i0 | PRJNA1228616 | 8901 | 150 | 2.271028 | 3.406542 | root | 1 | Root_unresolved | Root_unresolved | 272 | 8.609999999999998e-69 | NTclustered | gi|1591445900|gb|MK499518.1| | 66440 | g8878 | i0 | 99.333 | 10.8133333333333 | 150 | 1 | 100 | 0 | 1 | 150 | 91 | 240 | Tragelaphus scriptus clone Cl7 satellite SAT1.723 sequence | blastn | 1622 | 272 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Tragelaphus | Tragelaphus scriptus | |
| 1610205 | 1610205 | PRJNA1228616_S_NODE_3262_length_221_cov_1.488764_g3239_i0 | PRJNA1228616 | 3262 | 221 | 1.488764 | 3.29016844 | Bos taurus | 9913 | Chordata | Chordata | 392 | 1.0199999999999999e-104 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g3239 | i0 | 98.643 | 8.9683257918552 | 221 | 3 | 100 | 0 | 1 | 221 | 3967 | 3747 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 1982 | 392 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 1610209 | 1610209 | PRJNA1228616_S_NODE_5442_length_181_cov_2.108696_g5419_i0 | PRJNA1228616 | 5442 | 181 | 2.108696 | 3.81673976 | Rattus norvegicus | 10116 | Chordata | Chordata | 54.7 | 0.004 | NTclustered | gi|312261305|gb|AC242862.2| | 10116 | g5419 | i0 | 100 | 0.469613259668508 | 29 | 0 | 16 | 0 | 1 | 29 | 95401 | 95429 | Rattus norvegicus Y Chr BAC RNAEX-208K23 (Amplicon Express Rat SHR-Akr BAC library) complete sequence | blastn | 85 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1610211 | 1610211 | PRJNA1228616_S_NODE_5622_length_179_cov_0.889706_g5599_i0 | PRJNA1228616 | 5622 | 179 | 0.889706 | 1.59257374 | Mus musculus | 10090 | Chordata | Chordata | 326 | 8.09e-85 | NTclustered | gi|12859568|dbj|AK019389.1| | 10090 | g5599 | i0 | 99.441 | 13.1899441340782 | 179 | 1 | 100 | 0 | 1 | 179 | 736 | 558 | Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010025M23 product:beta-2 microglobulin, full insert sequence | blastn | 2361 | 326 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1610213 | 1610213 | PRJNA1228616_S_NODE_6122_length_173_cov_0.838462_g6099_i0 | PRJNA1228616 | 6122 | 173 | 0.838462 | 1.45053926 | Mus musculus | 10090 | Chordata | Chordata | 320 | 3.61e-83 | NTclustered | gi|354782646|gb|JN947147.1| | 10090 | g6099 | i0 | 100 | 93.7456647398844 | 173 | 0 | 100 | 0 | 1 | 173 | 29833 | 29661 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Lingo3:tm1a(KOMP)Wtsi; transgenic | blastn | 16218 | 320 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1610214 | 1610214 | PRJNA1228616_S_NODE_7182_length_163_cov_1.066667_g7159_i0 | PRJNA1228616 | 7182 | 163 | 1.066667 | 1.73866721 | Rattus norvegicus | 10116 | Chordata | Chordata | 302 | 1.22e-77 | NTclustered | gi|34419650|gb|AC131172.4| | 10116 | g7159 | i0 | 100 | 1.99386503067485 | 163 | 0 | 100 | 0 | 1 | 163 | 163222 | 163060 | Rattus norvegicus 5 BAC CH230-12K15 (Children's Hospital Oakland Research Institute) complete sequence | blastn | 325 | 302 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1610215 | 1610215 | PRJNA1228616_S_NODE_7642_length_159_cov_1.215517_g7619_i0 | PRJNA1228616 | 7642 | 159 | 1.215517 | 1.93267203 | Rattus norvegicus | 10116 | Chordata | Chordata | 294 | 1.98e-75 | NTclustered | gi|47084437|gb|AC107274.11| | 10116 | g7619 | i0 | 100 | 1 | 159 | 0 | 100 | 0 | 1 | 159 | 121565 | 121723 | Rattus norvegicus 18 BAC CH230-207M17 (Children's Hospital Oakland Research Institute) complete sequence | blastn | 159 | 294 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 2322442 | 2322442 | PRJNA1228616_S_NODE_1882_length_271_cov_2.960526_g1859_i0 | PRJNA1228616 | 1882 | 271 | 2.960526 | 8.02302546 | Bos | 9903 | Chordata | Chordata | 496 | 9.55e-136 | NTclustered | gi|2633693530|ref|XM_061429723.1| | 9906 | g1859 | i0 | 99.631 | 32.1512915129151 | 271 | 1 | 100 | 0 | 1 | 271 | 626 | 896 | PREDICTED: Bos javanicus beta-2-microglobulin (LOC133255119), mRNA | blastn | 8713 | 501 | 0.99001996007984 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 2322443 | 2322443 | PRJNA1228616_S_NODE_4062_length_203_cov_1.762500_g4039_i0 | PRJNA1228616 | 4062 | 203 | 1.7625 | 3.577875 | Bos | 9903 | Chordata | Chordata | 375 | 9.24e-100 | NTclustered | gi|2633693528|ref|XM_061429722.1| | 9906 | g4039 | i0 | 100 | 57.0147783251232 | 203 | 0 | 100 | 0 | 1 | 203 | 278 | 480 | PREDICTED: Bos javanicus beta-2-microglobulin (LOC133255118), mRNA | blastn | 11574 | 375 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 2322445 | 2322445 | PRJNA1228616_S_NODE_4322_length_198_cov_1.200000_g4299_i0 | PRJNA1228616 | 4322 | 198 | 1.2 | 2.376 | root | 1 | Root_unresolved | Root_unresolved | 361 | 2.51e-95 | NTclustered | gi|5639974|gb|AF162495.1|AF162495 | 9901 | g4299 | i0 | 99.495 | 76.7727272727273 | 198 | 1 | 100 | 0 | 1 | 198 | 81 | 278 | Bison bison satellite 1.711a, partial sequence | blastn | 15201 | 363 | 0.994490358126722 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bison | Bison bison | |
| 2322447 | 2322447 | PRJNA1228616_S_NODE_5842_length_176_cov_2.030075_g5819_i0 | PRJNA1228616 | 5842 | 176 | 2.030075 | 3.572932 | Mus | 10088 | Chordata | Chordata | 326 | 7.92e-85 | NTclustered | gi|74148625|dbj|AK140187.1| | 10090 | g5819 | i0 | 100 | 100 | 176 | 0 | 100 | 0 | 1 | 176 | 209 | 384 | Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230333I23 product:NADH dehydrogenase 4, mitochondrial, full insert sequence | blastn | 17600 | 326 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 2322448 | 2322448 | PRJNA1228616_S_NODE_8002_length_156_cov_1.849558_g7979_i0 | PRJNA1228616 | 8002 | 156 | 1.849558 | 2.88531048 | Mus | 10088 | Chordata | Chordata | 289 | 9e-74 | NTclustered | gi|74192697|dbj|AK159167.1| | 10090 | g7979 | i0 | 100 | 99.9935897435897 | 156 | 0 | 100 | 0 | 1 | 156 | 2507 | 2352 | Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420007A10 product:prosaposin, full insert sequence | blastn | 15599 | 289 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 2886480 | 2886480 | PRJNA1228616_S_NODE_143_length_650_cov_7.622735_g123_i0 | PRJNA1228616 | 143 | 650 | 7.622735 | 49.5477775 | Rattus norvegicus | 10116 | Chordata | Chordata | 1166 | 0 | NTclustered | gi|2678873536|ref|XR_005494725.2| | 10116 | g123 | i0 | 99.686 | 13.5046153846154 | 637 | 2 | 98 | 0 | 14 | 650 | 10333 | 10969 | PREDICTED: Rattus norvegicus uncharacterized LOC120097381 (LOC120097381), ncRNA | blastn | 8778 | 1166 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 2886482 | 2886482 | PRJNA1228616_S_NODE_3603_length_212_cov_6.384615_g3580_i0 | PRJNA1228616 | 3603 | 212 | 6.384615 | 13.5353838 | Hyla sarda | 327740 | Chordata | Chordata | 80.5 | 8.55e-11 | NTclustered | gi|2512136612|ref|XM_056541739.1| | 327740 | g3580 | i0 | 89.394 | 1.41981132075472 | 66 | 3 | 29 | 3 | 2 | 63 | 74 | 9 | PREDICTED: Hyla sarda olfactory receptor 6N1-like (LOC130293237), mRNA | blastn | 301 | 80.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Hylidae | Hyla | Hyla sarda | |
| 3597668 | 3597668 | PRJNA1228616_S_NODE_3183_length_223_cov_1.822222_g3160_i0 | PRJNA1228616 | 3183 | 223 | 1.822222 | 4.06355506 | Bos | 9903 | Chordata | Chordata | 412 | 7.88e-111 | NTclustered | gi|148745530|gb|BC141995.1| | 9913 | g3160 | i0 | 100 | 99.8744394618834 | 223 | 0 | 100 | 0 | 1 | 223 | 858 | 636 | Bos taurus ribosomal protein S4, Y-linked 2, mRNA (cDNA clone MGC:159460 IMAGE:8389095), complete cds | blastn | 22272 | 412 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 3597672 | 3597672 | PRJNA1228616_S_NODE_5263_length_183_cov_3.071429_g5240_i0 | PRJNA1228616 | 5263 | 183 | 3.071429 | 5.62071507 | Bovidae | 9895 | Chordata | Chordata | 339 | 1.07e-88 | NTclustered | gi|2633823911|ref|XM_061405013.1| | 9906 | g5240 | i0 | 100 | 98.3387978142077 | 183 | 0 | 100 | 0 | 1 | 183 | 1447 | 1629 | PREDICTED: Bos javanicus FXYD domain containing ion transport regulator 4 (FXYD4), transcript variant X2, mRNA | blastn | 17996 | 339 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 4162598 | 4162598 | PRJNA1228616_S_NODE_1984_length_266_cov_1.336323_g1961_i0 | PRJNA1228616 | 1984 | 266 | 1.336323 | 3.55461918 | Mus musculus | 10090 | Chordata | Chordata | 486 | 5.629999999999999e-133 | NTclustered | gi|52789311|gb|BC083066.1| | 10090 | g1961 | i0 | 99.624 | 83.4962406015038 | 266 | 1 | 100 | 0 | 1 | 266 | 116 | 381 | Mus musculus cDNA clone IMAGE:5371053 | blastn | 22210 | 486 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4162599 | 4162599 | PRJNA1228616_S_NODE_2644_length_240_cov_3.340102_g2621_i0 | PRJNA1228616 | 2644 | 240 | 3.340102 | 8.0162448 | Mus musculus | 10090 | Chordata | Chordata | 444 | 3.05e-120 | NTclustered | gi|74186785|dbj|AK159134.1| | 10090 | g2621 | i0 | 100 | 60.9541666666667 | 240 | 0 | 100 | 0 | 1 | 240 | 1741 | 1502 | Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420003H17 product:hexosaminidase B, full insert sequence | blastn | 14629 | 444 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4162603 | 4162603 | PRJNA1228616_S_NODE_5144_length_185_cov_0.992958_g5121_i0 | PRJNA1228616 | 5144 | 185 | 0.992958 | 1.8369723 | Bos indicus | 9915 | Chordata | Chordata | 331 | 1.81e-86 | NTclustered | gi|2878404697|ref|XR_011560725.1| | 9915 | g5121 | i0 | 98.919 | 5.02162162162162 | 185 | 2 | 100 | 0 | 1 | 185 | 227 | 411 | PREDICTED: Bos indicus uncharacterized lncRNA (LOC139176323), ncRNA | blastn | 929 | 331 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos indicus | |
| 4162605 | 4162605 | PRJNA1228616_S_NODE_5964_length_175_cov_1.037879_g5941_i0 | PRJNA1228616 | 5964 | 175 | 1.037879 | 1.81628825 | Mus musculus | 10090 | Chordata | Chordata | 305 | 1.02e-78 | NTclustered | gi|74212975|dbj|AK155762.1| | 10090 | g5941 | i0 | 98.286 | 14.3257142857143 | 175 | 2 | 100 | 1 | 1 | 175 | 1549 | 1722 | Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730217A05 product:selectin, platelet (p-selectin) ligand, full insert sequence | blastn | 2507 | 305 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4162611 | 4162611 | PRJNA1228616_S_NODE_964_length_338_cov_1.467797_g941_i0 | PRJNA1228616 | 964 | 338 | 1.467797 | 4.96115386 | Rattus norvegicus | 10116 | Chordata | Chordata | 619 | 6.969999999999999e-173 | NTclustered | gi|298905442|emb|FQ209776.1| | 10116 | g941 | i0 | 99.704 | 71.8224852071006 | 338 | 1 | 100 | 0 | 1 | 338 | 819 | 482 | Rattus norvegicus TL0ABA3YI19 mRNA sequence | blastn | 24276 | 619 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 4875201 | 4875201 | PRJNA1228616_S_NODE_6184_length_172_cov_2.054264_g6161_i0 | PRJNA1228616 | 6184 | 172 | 2.054264 | 3.53333408 | Bos | 9903 | Chordata | Chordata | 318 | 1.2899999999999999e-82 | NTclustered | gi|77735940|ref|NM_001034495.1| | 9913 | g6161 | i0 | 100 | 99.3139534883721 | 172 | 0 | 100 | 0 | 1 | 172 | 363 | 192 | Bos taurus ribosomal protein L35 (RPL35), mRNA | blastn | 17082 | 318 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 5438824 | 5438824 | PRJNA1228616_S_NODE_2305_length_252_cov_3.679426_g2282_i0 | PRJNA1228616 | 2305 | 252 | 3.679426 | 9.27215352 | Rattus norvegicus | 10116 | Chordata | Chordata | 466 | 6.89e-127 | NTclustered | gi|296041276|gb|HM152027.1| | 10116 | g2282 | i0 | 100 | 100.003968253968 | 252 | 0 | 100 | 0 | 1 | 252 | 11195 | 11446 | Rattus norvegicus strain LEW/NCrlBR mitochondrion, complete genome | blastn | 25201 | 466 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5438825 | 5438825 | PRJNA1228616_S_NODE_3725_length_210_cov_2.970060_g3702_i0 | PRJNA1228616 | 3725 | 210 | 2.97006 | 6.237126 | Mus musculus | 10090 | Chordata | Chordata | 388 | 1.24e-103 | NTclustered | gi|12846704|dbj|AK010927.1| | 10090 | g3702 | i0 | 100 | 99.2 | 210 | 0 | 100 | 0 | 1 | 210 | 424 | 215 | Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510008C04 product:hemoglobin, beta adult major chain, full insert sequence | blastn | 20832 | 388 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5438828 | 5438828 | PRJNA1228616_S_NODE_5305_length_183_cov_0.978571_g5282_i0 | PRJNA1228616 | 5305 | 183 | 0.978571 | 1.79078493 | Rattus norvegicus | 10116 | Chordata | Chordata | 327 | 2.31e-85 | NTclustered | gi|298882902|emb|FQ211292.1| | 10116 | g5282 | i0 | 98.907 | 100 | 183 | 2 | 100 | 0 | 1 | 183 | 38 | 220 | Rattus norvegicus TL0ABA13YI17 mRNA sequence | blastn | 18300 | 327 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 6149963 | 6149963 | PRJNA1228616_S_NODE_4305_length_198_cov_2.929032_g4282_i0 | PRJNA1228616 | 4305 | 198 | 2.929032 | 5.79948336 | Bos | 9903 | Chordata | Chordata | 366 | 5.4e-97 | NTclustered | gi|2633833248|ref|XM_061407523.1| | 9906 | g4282 | i0 | 100 | 98.4747474747475 | 198 | 0 | 100 | 0 | 1 | 198 | 676 | 479 | PREDICTED: Bos javanicus ribosomal protein lateral stalk subunit P2 (RPLP2), transcript variant X1, mRNA | blastn | 19498 | 366 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 6149964 | 6149964 | PRJNA1228616_S_NODE_4425_length_196_cov_2.777778_g4402_i0 | PRJNA1228616 | 4425 | 196 | 2.777778 | 5.44444488 | root | 1 | Root_unresolved | Root_unresolved | 363 | 6.899999999999998e-96 | NTclustered | gi|919185050|ref|NM_009976.4| | 10090 | g4402 | i0 | 100 | 69.9030612244898 | 196 | 0 | 100 | 0 | 1 | 196 | 397 | 202 | Mus musculus cystatin C (Cst3), mRNA | blastn | 13701 | 363 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6149965 | 6149965 | PRJNA1228616_S_NODE_445_length_430_cov_1.956072_g422_i0 | PRJNA1228616 | 445 | 430 | 1.956072 | 8.4111096 | Bos | 9903 | Chordata | Chordata | 675 | 0 | NTclustered | gi|2633684521|ref|XR_009736371.1| | 9906 | g422 | i0 | 96.341 | 1531.13720930233 | 410 | 15 | 95 | 0 | 1 | 410 | 3427 | 3836 | PREDICTED: Bos javanicus uncharacterized LOC133247386 (LOC133247386), ncRNA | blastn | 658389 | 676 | 0.998520710059172 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 6149966 | 6149966 | PRJNA1228616_S_NODE_565_length_401_cov_2.245810_g542_i0 | PRJNA1228616 | 565 | 401 | 2.24581 | 9.0056981 | Rattus | 10114 | Chordata | Chordata | 736 | 0 | NTclustered | gi|349080|gb|L22788.1|RATIBABP | 10116 | g542 | i0 | 99.751 | 75.7182044887781 | 401 | 1 | 100 | 0 | 1 | 401 | 480 | 80 | Rattus norvegicus 14 kDa bile acid-binding protein (I-BABP) mRNA, complete cds | blastn | 30363 | 736 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 6149967 | 6149967 | PRJNA1228616_S_NODE_7605_length_159_cov_2.094828_g7582_i0 | PRJNA1228616 | 7605 | 159 | 2.094828 | 3.33077652 | root | 1 | Root_unresolved | Root_unresolved | 294 | 1.98e-75 | NTclustered | gi|2633801148|ref|XM_061397602.1| | 9906 | g7582 | i0 | 100 | 50.3647798742138 | 159 | 0 | 100 | 0 | 1 | 159 | 678 | 836 | PREDICTED: Bos javanicus glutathione peroxidase 1 (GPX1), mRNA | blastn | 8008 | 294 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 6713276 | 6713276 | PRJNA1228616_S_NODE_1106_length_325_cov_3.773050_g1083_i0 | PRJNA1228616 | 1106 | 325 | 3.77305 | 12.2624125 | Bos taurus | 9913 | Chordata | Chordata | 595 | 1.1299999999999995e-165 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g1083 | i0 | 99.692 | 68.2707692307692 | 325 | 1 | 100 | 0 | 1 | 325 | 4538 | 4862 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 22188 | 595 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 6713277 | 6713277 | PRJNA1228616_S_NODE_1126_length_323_cov_1.982143_g1103_i0 | PRJNA1228616 | 1126 | 323 | 1.982143 | 6.40232189 | Mus musculus | 10090 | Chordata | Chordata | 592 | 1.4499999999999999e-164 | NTclustered | gi|74178096|dbj|AK150771.1| | 10090 | g1103 | i0 | 99.69 | 30.5015479876161 | 323 | 1 | 100 | 0 | 1 | 323 | 671 | 993 | Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830015E07 product:complement component 1, q subcomponent, alpha polypeptide, full insert sequence | blastn | 9852 | 592 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6713278 | 6713278 | PRJNA1228616_S_NODE_1266_length_311_cov_2.958955_g1243_i0 | PRJNA1228616 | 1266 | 311 | 2.958955 | 9.20235005 | Mus musculus | 10090 | Chordata | Chordata | 575 | 1.3899999999999995e-159 | NTclustered | gi|12858540|dbj|AK018701.1| | 10090 | g1243 | i0 | 100 | 99.9292604501608 | 311 | 0 | 100 | 0 | 1 | 311 | 572 | 262 | Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610005C23 product:TRANSTHYRETIN PRECURSOR (PREALBUMIN), full insert sequence | blastn | 31078 | 575 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6713279 | 6713279 | PRJNA1228616_S_NODE_1466_length_296_cov_3.098814_g1443_i0 | PRJNA1228616 | 1466 | 296 | 3.098814 | 9.17248944 | Bos taurus | 9913 | Chordata | Chordata | 507 | 4.88e-139 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g1443 | i0 | 99.639 | 31.1655405405405 | 277 | 1 | 94 | 0 | 1 | 277 | 2223 | 1947 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 9225 | 507 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 6713280 | 6713280 | PRJNA1228616_S_NODE_286_length_491_cov_10.680804_g264_i0 | PRJNA1228616 | 286 | 491 | 10.680804 | 52.44274764 | Rattus norvegicus | 10116 | Chordata | Chordata | 907 | 0 | NTclustered | gi|228014974|gb|FJ919767.1| | 10116 | g264 | i0 | 100 | 98.918533604888 | 491 | 0 | 100 | 0 | 1 | 491 | 8825 | 9315 | Rattus norvegicus strain WK/Kyoto mitochondrion, complete genome | blastn | 48569 | 907 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 6713285 | 6713285 | PRJNA1228616_S_NODE_7166_length_163_cov_1.375000_g7143_i0 | PRJNA1228616 | 7166 | 163 | 1.375 | 2.24125 | Mus musculus | 10090 | Chordata | Chordata | 302 | 1.22e-77 | NTclustered | gi|74226211|dbj|AK143189.1| | 10090 | g7143 | i0 | 100 | 2 | 163 | 0 | 100 | 0 | 1 | 163 | 1068 | 906 | Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130303P22 product:WD repeat and FYVE domain containing 3, full insert sequence | blastn | 326 | 302 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6713288 | 6713288 | PRJNA1228616_S_NODE_7746_length_158_cov_1.600000_g7723_i0 | PRJNA1228616 | 7746 | 158 | 1.6 | 2.528 | Mus musculus | 10090 | Chordata | Chordata | 292 | 7.07e-75 | NTclustered | gi|1907130482|ref|XM_030250539.2| | 10090 | g7723 | i0 | 100 | 2 | 158 | 0 | 100 | 0 | 1 | 158 | 13398 | 13555 | PREDICTED: Mus musculus low density lipoprotein receptor class A domain containing 4 (Ldlrad4), transcript variant X11, mRNA | blastn | 316 | 292 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6713292 | 6713292 | PRJNA1228616_S_NODE_8746_length_151_cov_1.305556_g8723_i0 | PRJNA1228616 | 8746 | 151 | 1.305556 | 1.97138956 | Odocoileus virginianus | 9874 | Chordata | Chordata | 126 | 7.16e-25 | NTclustered | gi|2871637593|ref|XM_020889188.2| | 9874 | g8723 | i0 | 87.85 | 68.841059602649 | 107 | 13 | 71 | 0 | 5 | 111 | 2215 | 2109 | PREDICTED: Odocoileus virginianus mixed lineage kinase domain like pseudokinase (MLKL), transcript variant X1, mRNA | blastn | 10395 | 126 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Cervidae | Odocoileus | Odocoileus virginianus | |
| 7425011 | 7425011 | PRJNA1228616_S_NODE_3546_length_214_cov_1.573099_g3523_i0 | PRJNA1228616 | 3546 | 214 | 1.573099 | 3.36643186 | Mus | 10088 | Chordata | Chordata | 396 | 7.559999999999996e-106 | NTclustered | gi|756142290|gb|KP260515.1| | 10090 | g3523 | i0 | 100 | 100 | 214 | 0 | 100 | 0 | 1 | 214 | 3615 | 3402 | Mus musculus strain ME mitochondrion, complete genome | blastn | 21400 | 396 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7425014 | 7425014 | PRJNA1228616_S_NODE_8326_length_154_cov_1.153153_g8303_i0 | PRJNA1228616 | 8326 | 154 | 1.153153 | 1.77585562 | Bos | 9903 | Chordata | Chordata | 285 | 1.14e-72 | NTclustered | gi|2633912535|ref|XM_061408910.1| | 9906 | g8303 | i0 | 100 | 26.0584415584416 | 154 | 0 | 100 | 0 | 1 | 154 | 714 | 867 | PREDICTED: Bos javanicus FUN14 domain containing 2 (FUNDC2), mRNA | blastn | 4013 | 285 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 7988996 | 7988996 | PRJNA1228616_S_NODE_367_length_454_cov_7.328467_g344_i0 | PRJNA1228616 | 367 | 454 | 7.328467 | 33.27124018 | Rattus norvegicus | 10116 | Chordata | Chordata | 839 | 0 | NTclustered | gi|228014974|gb|FJ919767.1| | 10116 | g344 | i0 | 100 | 99.9933920704846 | 454 | 0 | 100 | 0 | 1 | 454 | 8569 | 8116 | Rattus norvegicus strain WK/Kyoto mitochondrion, complete genome | blastn | 45397 | 839 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7989005 | 7989005 | PRJNA1228616_S_NODE_7007_length_164_cov_2.033058_g6984_i0 | PRJNA1228616 | 7007 | 164 | 2.033058 | 3.33421512 | Mus musculus | 10090 | Chordata | Chordata | 117 | 4.79e-22 | NTclustered | gi|52219314|gb|AC107452.10| | 10090 | g6984 | i0 | 87.5 | 220.067073170732 | 104 | 10 | 62 | 3 | 22 | 123 | 145657 | 145555 | Mus musculus chromosome 15, clone RP23-236C21, complete sequence | blastn | 36091 | 117 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8700138 | 8700138 | PRJNA1228616_S_NODE_1067_length_328_cov_5.249123_g1044_i0 | PRJNA1228616 | 1067 | 328 | 5.249123 | 17.21712344 | Bos | 9903 | Chordata | Chordata | 606 | 5.249999999999998e-169 | NTclustered | gi|1542956816|ref|XM_027544733.1| | 30522 | g1044 | i0 | 100 | 42.2378048780488 | 328 | 0 | 100 | 0 | 1 | 328 | 776 | 449 | PREDICTED: Bos indicus x Bos taurus platelet factor 4 (LOC113894380), mRNA | blastn | 13854 | 606 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos indicus x Bos taurus | |
| 8700139 | 8700139 | PRJNA1228616_S_NODE_1147_length_321_cov_3.330935_g1124_i0 | PRJNA1228616 | 1147 | 321 | 3.330935 | 10.69230135 | Bovidae | 9895 | Chordata | Chordata | 593 | 3.9899999999999986e-165 | NTclustered | gi|2633864476|ref|XM_061416859.1| | 9906 | g1124 | i0 | 100 | 95.6573208722741 | 321 | 0 | 100 | 0 | 1 | 321 | 4942 | 5262 | PREDICTED: Bos javanicus proliferation-associated 2G4 (PA2G4), mRNA | blastn | 30706 | 593 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 9975212 | 9975212 | PRJNA1228616_S_NODE_7528_length_160_cov_1.205128_g7505_i0 | PRJNA1228616 | 7528 | 160 | 1.205128 | 1.9282048 | Bos | 9903 | Chordata | Chordata | 296 | 5.55e-76 | NTclustered | gi|2633759955|ref|XM_061388578.1| | 9906 | g7505 | i0 | 100 | 100.075 | 160 | 0 | 100 | 0 | 1 | 160 | 2175 | 2016 | PREDICTED: Bos javanicus zinc finger protein 180 (ZNF180), transcript variant X4, mRNA | blastn | 16012 | 296 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 10539437 | 10539437 | PRJNA1228616_S_NODE_3889_length_207_cov_1.731707_g3866_i0 | PRJNA1228616 | 3889 | 207 | 1.731707 | 3.58463349 | Mus musculus | 10090 | Chordata | Chordata | 383 | 5.65e-102 | NTclustered | gi|38148658|gb|BC060635.1| | 10090 | g3866 | i0 | 100 | 28.0096618357488 | 207 | 0 | 100 | 0 | 1 | 207 | 4759 | 4553 | Mus musculus cDNA clone IMAGE:6849113, containing frame-shift errors | blastn | 5798 | 383 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10539442 | 10539442 | PRJNA1228616_S_NODE_5769_length_177_cov_1.902985_g5746_i0 | PRJNA1228616 | 5769 | 177 | 1.902985 | 3.36828345 | Rattus rattus | 10117 | Chordata | Chordata | 327 | 2.2199999999999996e-85 | NTclustered | gi|1820991803|ref|XM_032906211.1| | 10117 | g5746 | i0 | 100 | 25.7344632768362 | 177 | 0 | 100 | 0 | 1 | 177 | 134 | 310 | PREDICTED: Rattus rattus cytochrome P450 26B1 (LOC116903588), mRNA | blastn | 4555 | 327 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus rattus | |
| 10539444 | 10539444 | PRJNA1228616_S_NODE_6509_length_169_cov_1.119048_g6486_i0 | PRJNA1228616 | 6509 | 169 | 1.119048 | 1.89119112 | Bos taurus | 9913 | Chordata | Chordata | 313 | 5.859999999999999e-81 | NTclustered | gi|2587624878|ref|XM_059890934.1| | 9913 | g6486 | i0 | 100 | 25.5621301775148 | 169 | 0 | 100 | 0 | 1 | 169 | 185 | 353 | PREDICTED: Bos taurus mitotic deacetylase associated SANT domain protein (MIDEAS), transcript variant X2, mRNA | blastn | 4320 | 313 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 10539449 | 10539449 | PRJNA1228616_S_NODE_9009_length_150_cov_0.897196_g8986_i0 | PRJNA1228616 | 9009 | 150 | 0.897196 | 1.345794 | Mus musculus | 10090 | Chordata | Chordata | 250 | 4.04e-62 | NTclustered | gi|33416475|gb|BC055745.1| | 10090 | g8986 | i0 | 97.917 | 81.1933333333333 | 144 | 3 | 96 | 0 | 1 | 144 | 1864 | 2007 | Mus musculus interferon gamma receptor 2, mRNA (cDNA clone MGC:67077 IMAGE:6403454), complete cds | blastn | 12179 | 250 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 11250467 | 11250467 | PRJNA1228616_S_NODE_6709_length_167_cov_1.403226_g6686_i0 | PRJNA1228616 | 6709 | 167 | 1.403226 | 2.34338742 | Bos | 9903 | Chordata | Chordata | 198 | 1.7e-46 | NTclustered | gi|2587623998|ref|XM_010809049.3| | 9913 | g6686 | i0 | 100 | 20.502994011976 | 107 | 0 | 64 | 0 | 1 | 107 | 1488 | 1594 | PREDICTED: Bos taurus immunoglobulin superfamily DCC subclass member 3 (IGDCC3), mRNA | blastn | 3424 | 198 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 11250468 | 11250468 | PRJNA1228616_S_NODE_8709_length_151_cov_1.740741_g8686_i0 | PRJNA1228616 | 8709 | 151 | 1.740741 | 2.62851891 | Bos | 9903 | Chordata | Chordata | 279 | 5.19e-71 | NTclustered | gi|2633912745|ref|XM_061408974.1| | 9906 | g8686 | i0 | 100 | 93.7814569536424 | 151 | 0 | 100 | 0 | 1 | 151 | 663 | 513 | PREDICTED: Bos javanicus signal sequence receptor subunit 4 (SSR4), transcript variant X1, mRNA | blastn | 14161 | 279 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 11814190 | 11814190 | PRJNA1228616_S_NODE_4110_length_202_cov_1.823899_g4087_i0 | PRJNA1228616 | 4110 | 202 | 1.823899 | 3.68427598 | Mus musculus | 10090 | Chordata | Chordata | 374 | 3.3e-99 | NTclustered | gi|354784615|gb|JN949116.1| | 10090 | g4087 | i0 | 100 | 100.242574257426 | 202 | 0 | 100 | 0 | 1 | 202 | 22755 | 22956 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Btg2:tm1a(KOMP)Ucd; transgenic | blastn | 20249 | 374 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 11814195 | 11814195 | PRJNA1228616_S_NODE_550_length_403_cov_8.777778_g527_i0 | PRJNA1228616 | 550 | 403 | 8.777778 | 35.37444534 | Rattus norvegicus | 10116 | Chordata | Chordata | 728 | 0 | NTclustered | gi|2678886437|ref|XM_063270893.1| | 10116 | g527 | i0 | 99.259 | 2.41687344913151 | 405 | 0 | 100 | 3 | 1 | 403 | 1214 | 811 | PREDICTED: Rattus norvegicus uncharacterized LOC134481045 (LOC134481045), mRNA | blastn | 974 | 728 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 11814196 | 11814196 | PRJNA1228616_S_NODE_5710_length_178_cov_1.296296_g5687_i0 | PRJNA1228616 | 5710 | 178 | 1.296296 | 2.30740688 | Rattus norvegicus | 10116 | Chordata | Chordata | 329 | 6.21e-86 | NTclustered | gi|171461036|gb|AC118115.7| | 10116 | g5687 | i0 | 100 | 5.14606741573034 | 178 | 0 | 100 | 0 | 1 | 178 | 92455 | 92632 | Rattus norvegicus BAC CH230-477B14 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence | blastn | 916 | 329 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 11814202 | 11814202 | PRJNA1228616_S_NODE_7270_length_162_cov_2.201681_g7247_i0 | PRJNA1228616 | 7270 | 162 | 2.2016810000000002 | 3.56672322 | Rattus norvegicus | 10116 | Chordata | Chordata | 300 | 4.36e-77 | NTclustered | gi|2678873636|ref|XR_010061210.1| | 10116 | g7247 | i0 | 100 | 5.74691358024691 | 162 | 0 | 100 | 0 | 1 | 162 | 26268 | 26429 | PREDICTED: Rattus norvegicus uncharacterized LOC120100000 (LOC120100000), ncRNA | blastn | 931 | 300 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 12525821 | 12525821 | PRJNA1228616_S_NODE_2310_length_252_cov_2.330144_g2287_i0 | PRJNA1228616 | 2310 | 252 | 2.330144 | 5.87196288 | Mus | 10088 | Chordata | Chordata | 466 | 6.89e-127 | NTclustered | gi|846387676|dbj|LC061971.1| | 10090 | g2287 | i0 | 100 | 100 | 252 | 0 | 100 | 0 | 1 | 252 | 1683 | 1432 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_20 | blastn | 25200 | 466 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 12525822 | 12525822 | PRJNA1228616_S_NODE_4230_length_200_cov_1.025478_g4207_i0 | PRJNA1228616 | 4230 | 200 | 1.025478 | 2.050956 | root | 1 | Root_unresolved | Root_unresolved | 340 | 3.31e-89 | NTclustered | gi|703|emb|X03116.1| | 9913 | g4207 | i0 | 97.487 | 46.47 | 199 | 5 | 99 | 0 | 2 | 200 | 1 | 199 | Bovine satellite II DNA repeat unit | blastn | 9294 | 342 | 0.994152046783626 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 12525823 | 12525823 | PRJNA1228616_S_NODE_8610_length_152_cov_1.082569_g8587_i0 | PRJNA1228616 | 8610 | 152 | 1.082569 | 1.64550488 | Bovidae | 9895 | Chordata | Chordata | 281 | 1.46e-71 | NTclustered | gi|2633718985|ref|XM_061436902.1| | 9906 | g8587 | i0 | 100 | 99.5131578947368 | 152 | 0 | 100 | 0 | 1 | 152 | 504 | 353 | PREDICTED: Bos javanicus pancreatic progenitor cell differentiation and proliferation factor (PPDPF), transcript variant X1, mRNA | blastn | 15126 | 281 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 13800478 | 13800478 | PRJNA1228616_S_NODE_4231_length_200_cov_0.891720_g4208_i0 | PRJNA1228616 | 4231 | 200 | 0.89172 | 1.78344 | Artiodactyla | 91561 | Chordata | Chordata | 233 | 5.779999999999999e-57 | NTclustered | gi|2633780543|ref|XM_061382228.1| | 9906 | g4208 | i0 | 93.125 | 1131.455 | 160 | 10 | 80 | 1 | 23 | 182 | 4191 | 4349 | PREDICTED: Bos javanicus inducible T cell costimulator (ICOS), mRNA | blastn | 226291 | 233 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 13800480 | 13800480 | PRJNA1228616_S_NODE_6711_length_167_cov_1.387097_g6688_i0 | PRJNA1228616 | 6711 | 167 | 1.387097 | 2.31645199 | Mus | 10088 | Chordata | Chordata | 309 | 7.53e-80 | NTclustered | gi|846387586|dbj|LC061956.1| | 10090 | g6688 | i0 | 100 | 100 | 167 | 0 | 100 | 0 | 1 | 167 | 841 | 675 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_5 | blastn | 16700 | 309 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 14364556 | 14364556 | PRJNA1228616_S_NODE_2432_length_248_cov_1.312195_g2409_i0 | PRJNA1228616 | 2432 | 248 | 1.312195 | 3.2542436 | Bos taurus | 9913 | Chordata | Chordata | 357 | 4.24e-94 | NTclustered | gi|2587618203|ref|XR_009493738.1| | 9913 | g2409 | i0 | 98.995 | 107.947580645161 | 199 | 2 | 80 | 0 | 1 | 199 | 8628 | 8826 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344779), transcript variant X2, ncRNA | blastn | 26771 | 357 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 14364564 | 14364564 | PRJNA1228616_S_NODE_6352_length_170_cov_3.881890_g6329_i0 | PRJNA1228616 | 6352 | 170 | 3.88189 | 6.599213 | Rattus norvegicus | 10116 | Chordata | Chordata | 315 | 1.64e-81 | NTclustered | gi|298887632|emb|FQ233546.1| | 10116 | g6329 | i0 | 100 | 13.3 | 170 | 0 | 100 | 0 | 1 | 170 | 338 | 169 | Rattus norvegicus TL0AEA61YG18 mRNA sequence | blastn | 2261 | 315 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 14364566 | 14364566 | PRJNA1228616_S_NODE_7912_length_157_cov_1.114035_g7889_i0 | PRJNA1228616 | 7912 | 157 | 1.114035 | 1.74903495 | Oryx dammah | 59534 | Chordata | Chordata | 246 | 5.54e-61 | NTclustered | gi|2009570918|ref|XR_005718443.1| | 59534 | g7889 | i0 | 94.904 | 3 | 157 | 8 | 100 | 0 | 1 | 157 | 1114 | 958 | PREDICTED: Oryx dammah uncharacterized LOC120851934 (LOC120851934), ncRNA | blastn | 471 | 246 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Oryx | Oryx dammah | |
| 14364569 | 14364569 | PRJNA1228616_S_NODE_8992_length_150_cov_1.261682_g8969_i0 | PRJNA1228616 | 8992 | 150 | 1.261682 | 1.892523 | Bos indicus | 9915 | Chordata | Chordata | 272 | 8.609999999999998e-69 | NTclustered | gi|2878402011|ref|XM_070804251.1| | 9915 | g8969 | i0 | 99.333 | 1 | 150 | 1 | 100 | 0 | 1 | 150 | 10305 | 10454 | PREDICTED: Bos indicus olfactory receptor 4S1 (LOC109569948), mRNA | blastn | 150 | 272 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos indicus | |
| 15074726 | 15074726 | PRJNA1228616_S_NODE_3152_length_224_cov_1.403315_g3129_i0 | PRJNA1228616 | 3152 | 224 | 1.403315 | 3.1434256 | Bos | 9903 | Chordata | Chordata | 409 | 1.03e-109 | NTclustered | gi|114051525|ref|NM_001046593.1| | 9913 | g3129 | i0 | 99.554 | 31.3883928571429 | 224 | 1 | 100 | 0 | 1 | 224 | 1505 | 1728 | Bos taurus coactosin like F-actin binding protein 1 (COTL1), mRNA | blastn | 7031 | 409 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 15074728 | 15074728 | PRJNA1228616_S_NODE_5212_length_184_cov_1.460993_g5189_i0 | PRJNA1228616 | 5212 | 184 | 1.460993 | 2.68822712 | root | 1 | Root_unresolved | Root_unresolved | 340 | 2.99e-89 | NTclustered | gi|1068294018|gb|KX592814.1| | 9913 | g5189 | i0 | 100 | 431.027173913043 | 184 | 0 | 100 | 0 | 1 | 184 | 2824883 | 2825066 | Bos taurus isolate Dominette_000065F genomic sequence | blastn | 79309 | 340 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 15074729 | 15074729 | PRJNA1228616_S_NODE_6012_length_174_cov_1.793893_g5989_i0 | PRJNA1228616 | 6012 | 174 | 1.793893 | 3.12137382 | Bovidae | 9895 | Chordata | Chordata | 254 | 3.74e-63 | NTclustered | gi|2633785438|ref|XR_009732400.1| | 9906 | g5989 | i0 | 93.529 | 92.6091954022989 | 170 | 11 | 98 | 0 | 5 | 174 | 2750 | 2581 | PREDICTED: Bos javanicus uncharacterized LOC133235005 (LOC133235005), transcript variant X2, ncRNA | blastn | 16114 | 254 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 15074730 | 15074730 | PRJNA1228616_S_NODE_6412_length_170_cov_1.275591_g6389_i0 | PRJNA1228616 | 6412 | 170 | 1.275591 | 2.1685047 | Bos | 9903 | Chordata | Chordata | 315 | 1.64e-81 | NTclustered | gi|2878523443|ref|XM_070788388.1| | 9915 | g6389 | i0 | 100 | 93.2941176470588 | 170 | 0 | 100 | 0 | 1 | 170 | 1276 | 1107 | PREDICTED: Bos indicus GTPase, IMAP family member 1 (GIMAP1), transcript variant X3, mRNA | blastn | 15860 | 315 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos indicus | |
| 15638503 | 15638503 | PRJNA1228616_S_NODE_2493_length_246_cov_1.157635_g2470_i0 | PRJNA1228616 | 2493 | 246 | 1.157635 | 2.8477821 | Bos taurus | 9913 | Chordata | Chordata | 455 | 1.4500000000000002e-123 | NTclustered | gi|2587651118|ref|XM_024980698.2| | 9913 | g2470 | i0 | 100 | 25.5650406504065 | 246 | 0 | 100 | 0 | 1 | 246 | 3863 | 3618 | PREDICTED: Bos taurus refilin B (RFLNB), transcript variant X2, mRNA | blastn | 6289 | 455 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 15638504 | 15638504 | PRJNA1228616_S_NODE_533_length_406_cov_18.826446_g510_i0 | PRJNA1228616 | 533 | 406 | 18.826446 | 76.43537076 | Bos taurus | 9913 | Chordata | Chordata | 717 | 0 | NTclustered | gi|693|emb|V00115.1| | 9913 | g510 | i0 | 98.522 | 44.8546798029557 | 406 | 6 | 100 | 0 | 1 | 406 | 668 | 263 | Bos taurus 1.711a satellite DNA with insert INS-1.711A. (extends from base 501 to 1151) | blastn | 18211 | 717 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 15638506 | 15638506 | PRJNA1228616_S_NODE_6013_length_174_cov_1.702290_g5990_i0 | PRJNA1228616 | 6013 | 174 | 1.70229 | 2.9619846 | Mus caroli | 10089 | Chordata | Chordata | 311 | 2.19e-80 | NTclustered | gi|1679827994|ref|XM_021186550.2| | 10089 | g5990 | i0 | 98.851 | 99.7068965517241 | 174 | 2 | 100 | 0 | 1 | 174 | 528 | 355 | PREDICTED: Mus caroli ribosomal protein S10 (Rps10), mRNA | blastn | 17349 | 311 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus caroli | |
| 16349610 | 16349610 | PRJNA1228616_S_NODE_4673_length_192_cov_1.946309_g4650_i0 | PRJNA1228616 | 4673 | 192 | 1.946309 | 3.73691328 | Bovidae | 9895 | Chordata | Chordata | 333 | 5.269999999999999e-87 | NTclustered | gi|2587692877|ref|XR_009495397.1| | 9913 | g4650 | i0 | 97.917 | 1219.796875 | 192 | 4 | 100 | 0 | 1 | 192 | 10260 | 10069 | PREDICTED: Bos taurus uncharacterized protein (LOC104969038), transcript variant X6, misc_RNA | blastn | 234201 | 333 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 16349611 | 16349611 | PRJNA1228616_S_NODE_6413_length_170_cov_1.259843_g6390_i0 | PRJNA1228616 | 6413 | 170 | 1.259843 | 2.1417331 | Bovidae | 9895 | Chordata | Chordata | 287 | 3.58e-73 | NTclustered | gi|1068294018|gb|KX592814.1| | 9913 | g6390 | i0 | 97.605 | 242.22352941176501 | 167 | 4 | 99 | 0 | 1 | 167 | 4957324 | 4957158 | Bos taurus isolate Dominette_000065F genomic sequence | blastn | 41178 | 287 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 16349612 | 16349612 | PRJNA1228616_S_NODE_8253_length_154_cov_2.540541_g8230_i0 | PRJNA1228616 | 8253 | 154 | 2.540541 | 3.91243314 | Chordata | 7711 | Chordata | Chordata | 52.8 | 0.013 | NTclustered | gi|27356738|gb|AC129220.3| | 10090 | g8230 | i0 | 100 | 1.09090909090909 | 28 | 0 | 18 | 0 | 1 | 28 | 91863 | 91836 | Mus musculus BAC clone RP24-475J22 from chromosome 5, complete sequence | blastn | 168 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16912656 | 16912656 | PRJNA1228616_S_NODE_1094_length_326_cov_2.681979_g1071_i0 | PRJNA1228616 | 1094 | 326 | 2.681979 | 8.74325154 | Bos indicus | 9915 | Chordata | Chordata | 595 | 1.1299999999999995e-165 | NTclustered | gi|2878387248|ref|XM_019972473.2| | 9915 | g1071 | i0 | 99.692 | 53.8680981595092 | 325 | 1 | 99 | 0 | 1 | 325 | 652 | 976 | PREDICTED: Bos indicus spleen trypsin inhibitor I (LOC109567490), mRNA | blastn | 17561 | 595 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos indicus | |
| 16912657 | 16912657 | PRJNA1228616_S_NODE_1434_length_298_cov_2.917647_g1411_i0 | PRJNA1228616 | 1434 | 298 | 2.917647 | 8.69458806 | Bos taurus | 9913 | Chordata | Chordata | 545 | 1.04e-150 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g1411 | i0 | 99.664 | 24.2785234899329 | 298 | 1 | 100 | 0 | 1 | 298 | 3586 | 3289 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 7235 | 545 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 16912661 | 16912661 | PRJNA1228616_S_NODE_3154_length_224_cov_1.226519_g3131_i0 | PRJNA1228616 | 3154 | 224 | 1.226519 | 2.74740256 | Mus musculus | 10090 | Chordata | Chordata | 414 | 2.1999999999999996e-111 | NTclustered | gi|26329110|dbj|AK033448.1| | 10090 | g3131 | i0 | 100 | 52.3616071428571 | 224 | 0 | 100 | 0 | 1 | 224 | 1122 | 899 | Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030207C05 product:purinergic receptor P2Y12, full insert sequence | blastn | 11729 | 414 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16912664 | 16912664 | PRJNA1228616_S_NODE_5594_length_179_cov_2.404412_g5571_i0 | PRJNA1228616 | 5594 | 179 | 2.404412 | 4.30389748 | Sitta europaea | 50251 | Chordata | Chordata | 54.7 | 0.004 | NTclustered | gi|2917594652|emb|OZ228658.1| | 50251 | g5571 | i0 | 100 | 0.324022346368715 | 29 | 0 | 16 | 0 | 151 | 179 | 23522544 | 23522516 | Sitta europaea genome assembly, chromosome: 4 | blastn | 58 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Sittidae | Sitta | Sitta europaea | |
| 16912668 | 16912668 | PRJNA1228616_S_NODE_7754_length_158_cov_1.504348_g7731_i0 | PRJNA1228616 | 7754 | 158 | 1.504348 | 2.37686984 | Rattus norvegicus | 10116 | Chordata | Chordata | 292 | 7.07e-75 | NTclustered | gi|298907073|emb|FQ231961.1| | 10116 | g7731 | i0 | 100 | 31.1012658227848 | 158 | 0 | 100 | 0 | 1 | 158 | 967 | 810 | Rattus norvegicus TL0AEA67YI15 mRNA sequence | blastn | 4914 | 292 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 17624859 | 17624859 | PRJNA1228616_S_NODE_5534_length_180_cov_1.277372_g5511_i0 | PRJNA1228616 | 5534 | 180 | 1.277372 | 2.2992696 | Bos | 9903 | Chordata | Chordata | 283 | 4.97e-72 | NTclustered | gi|2633917727|ref|XR_009735100.1| | 9906 | g5511 | i0 | 95 | 277.861111111111 | 180 | 9 | 100 | 0 | 1 | 180 | 23384 | 23205 | PREDICTED: Bos javanicus uncharacterized LOC133243504 (LOC133243504), ncRNA | blastn | 50015 | 283 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 17624861 | 17624861 | PRJNA1228616_S_NODE_8054_length_156_cov_0.893805_g8031_i0 | PRJNA1228616 | 8054 | 156 | 0.893805 | 1.3943358 | Artiodactyla | 91561 | Chordata | Chordata | 195 | 2.02e-45 | NTclustered | gi|2745998400|ref|XM_065946394.1| | 9886 | g8031 | i0 | 95.868 | 276.294871794872 | 121 | 4 | 77 | 1 | 35 | 154 | 3905 | 3785 | PREDICTED: Muntiacus reevesi cell division cycle 14B (CDC14B), transcript variant X7, mRNA | blastn | 43102 | 195 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Cervidae | Muntiacus | Muntiacus reevesi | |
| 18187108 | 18187108 | PRJNA1228616_S_NODE_2455_length_247_cov_1.970588_g2432_i0 | PRJNA1228616 | 2455 | 247 | 1.970588 | 4.86735236 | Mus musculus | 10090 | Chordata | Chordata | 457 | 4.05e-124 | NTclustered | gi|354794619|gb|JN959120.1| | 10090 | g2432 | i0 | 100 | 16.8663967611336 | 247 | 0 | 100 | 0 | 1 | 247 | 25398 | 25644 | Mus musculus targeted deletion, lacZ-tagged mutant allele Apoa2:tm1(KOMP)Wtsi; transgenic | blastn | 4166 | 457 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18187109 | 18187109 | PRJNA1228616_S_NODE_3095_length_225_cov_3.445055_g3072_i0 | PRJNA1228616 | 3095 | 225 | 3.445055 | 7.75137375 | Mus musculus | 10090 | Chordata | Chordata | 416 | 6.159999999999998e-112 | NTclustered | gi|354795652|gb|JN960153.1| | 10090 | g3072 | i0 | 100 | 99.6755555555556 | 225 | 0 | 100 | 0 | 1 | 225 | 10694 | 10470 | Mus musculus targeted deletion, lacZ-tagged mutant allele Apoc1:tm1(KOMP)Ucd; transgenic | blastn | 22427 | 416 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18187110 | 18187110 | PRJNA1228616_S_NODE_4215_length_200_cov_1.796178_g4192_i0 | PRJNA1228616 | 4215 | 200 | 1.796178 | 3.592356 | Mus musculus | 10090 | Chordata | Chordata | 370 | 4.22e-98 | NTclustered | gi|2698754058|ref|NM_001428553.1| | 10090 | g4192 | i0 | 100 | 59.2 | 200 | 0 | 100 | 0 | 1 | 200 | 1040 | 1239 | Mus musculus cathepsin L (Ctsl), transcript variant 5, mRNA | blastn | 11840 | 370 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18187112 | 18187112 | PRJNA1228616_S_NODE_535_length_406_cov_10.435262_g512_i0 | PRJNA1228616 | 535 | 406 | 10.435262 | 42.36716372 | Mus musculus | 10090 | Chordata | Chordata | 739 | 0 | NTclustered | gi|919185050|ref|NM_009976.4| | 10090 | g512 | i0 | 99.509 | 72.9014778325123 | 407 | 1 | 100 | 1 | 1 | 406 | 789 | 383 | Mus musculus cystatin C (Cst3), mRNA | blastn | 29598 | 739 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18187113 | 18187113 | PRJNA1228616_S_NODE_5455_length_181_cov_1.536232_g5432_i0 | PRJNA1228616 | 5455 | 181 | 1.536232 | 2.78057992 | Mus musculus | 10090 | Chordata | Chordata | 329 | 6.340000000000001e-86 | NTclustered | gi|74213456|dbj|AK159992.1| | 10090 | g5432 | i0 | 99.448 | 29.5359116022099 | 181 | 1 | 100 | 0 | 1 | 181 | 1909 | 1729 | Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420042O20 product:cathepsin B, full insert sequence | blastn | 5346 | 329 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18187115 | 18187115 | PRJNA1228616_S_NODE_5955_length_175_cov_1.318182_g5932_i0 | PRJNA1228616 | 5955 | 175 | 1.318182 | 2.3068185 | Bos javanicus | 9906 | Chordata | Chordata | 241 | 2.93e-59 | NTclustered | gi|2633874947|ref|XM_061420324.1| | 9906 | g5932 | i0 | 91.429 | 425.417142857143 | 175 | 15 | 100 | 0 | 1 | 175 | 5052 | 4878 | PREDICTED: Bos javanicus signal transducing adaptor family member 1 (STAP1), transcript variant X1, mRNA | blastn | 74448 | 241 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 18187123 | 18187123 | PRJNA1228616_S_NODE_9035_length_150_cov_0.878505_g9012_i0 | PRJNA1228616 | 9035 | 150 | 0.878505 | 1.3177575 | Rattus norvegicus | 10116 | Chordata | Chordata | 278 | 1.85e-70 | NTclustered | gi|228014974|gb|FJ919767.1| | 10116 | g9012 | i0 | 100 | 100 | 150 | 0 | 100 | 0 | 1 | 150 | 4405 | 4256 | Rattus norvegicus strain WK/Kyoto mitochondrion, complete genome | blastn | 15000 | 278 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 19461572 | 19461572 | PRJNA1228616_S_NODE_2316_length_252_cov_1.593301_g2293_i0 | PRJNA1228616 | 2316 | 252 | 1.593301 | 4.01511852 | Mus musculus | 10090 | Chordata | Chordata | 433 | 6.98e-117 | NTclustered | gi|1060926|dbj|D26610.1|MUSMNSFB | 10090 | g2293 | i0 | 97.992 | 97.4166666666667 | 249 | 5 | 99 | 0 | 4 | 252 | 371 | 123 | Mus musculus MNSF-beta mRNA for monoclonal nonspecific suppressor factor beta, complete cds | blastn | 24549 | 433 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 19461574 | 19461574 | PRJNA1228616_S_NODE_4376_length_197_cov_1.831169_g4353_i0 | PRJNA1228616 | 4376 | 197 | 1.831169 | 3.60740293 | Mus musculus | 10090 | Chordata | Chordata | 364 | 1.929999999999999e-96 | NTclustered | gi|354790908|gb|JN955409.1| | 10090 | g4353 | i0 | 100 | 26.9390862944162 | 197 | 0 | 100 | 0 | 1 | 197 | 24336 | 24532 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Tmem119:tm1a(EUCOMM)Wtsi; transgenic | blastn | 5307 | 364 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 19461575 | 19461575 | PRJNA1228616_S_NODE_4816_length_190_cov_1.598639_g4793_i0 | PRJNA1228616 | 4816 | 190 | 1.598639 | 3.0374141 | Bos taurus | 9913 | Chordata | Chordata | 351 | 1.4399999999999997e-92 | NTclustered | gi|79158750|gb|BC108160.1| | 9913 | g4793 | i0 | 100 | 28.9631578947368 | 190 | 0 | 100 | 0 | 1 | 190 | 429 | 618 | Bos taurus TCTEL1 protein, mRNA (cDNA clone MGC:134363 IMAGE:8057994), complete cds | blastn | 5503 | 351 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 19461578 | 19461578 | PRJNA1228616_S_NODE_5996_length_174_cov_3.160305_g5973_i0 | PRJNA1228616 | 5996 | 174 | 3.160305 | 5.4989307 | Mus musculus | 10090 | Chordata | Chordata | 322 | 1.01e-83 | NTclustered | gi|7259301|dbj|AB030204.1| | 10090 | g5973 | i0 | 100 | 82.051724137931 | 174 | 0 | 100 | 0 | 1 | 174 | 645 | 818 | Mus musculus mRNA for E25B protein, complete cds, clone:2-79 | blastn | 14277 | 322 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;