RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1227535" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1227535 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26977838 26977838 PRJNA1227535_P_NODE_18702_length_263_cov_1.257895_g18578_i0 PRJNA1227535 18702 263 1.257895 3.30826385 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 84.3 7.02e-17   NR MBL0186372.1 2711154 g18578 i0 76.4 0.627376425855513 55 13 62.7 0 165 1 1 55 MBL0186372.1 ABC transporter permease [Candidatus Obscuribacter sp.] diamond 165 84.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
28683536 28683536 PRJNA1227535_P_NODE_11307_length_288_cov_1.306977_g11184_i0 PRJNA1227535 11307 288 1.306977 3.76409376 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 162 2.08e-44   NR MCA0315251.1 2052166 g11184 i0 82.1 0.989583333333333 95 17 99 0 287 3 352 446 MCA0315251.1 hypothetical protein [Candidatus Melainabacteria bacterium] diamond 285 162 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
29314876 29314876 PRJNA1227535_P_NODE_27529_length_246_cov_0.901734_g27405_i0 PRJNA1227535 27529 246 0.901734 2.21826564 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 150 5.16e-40   NR MCA0313749.1 2052166 g27405 i0 100 0.98780487804878 81 0 98.8 0 244 2 774 854 MCA0313749.1 hypothetical protein [Candidatus Melainabacteria bacterium] diamond 243 150 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
29946481 29946481 PRJNA1227535_P_NODE_23291_length_251_cov_1.533708_g23167_i0 PRJNA1227535 23291 251 1.533708 3.84960708 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 172 3.06e-51   NR MBY0549652.1 2364082 g23167 i0 100 0.99203187250996006 83 0 99.2 0 250 2 227 309 MBY0549652.1 SDR family oxidoreductase [Candidatus Obscuribacterales bacterium] diamond 249 172 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31323758 31323758 PRJNA1227535_P_NODE_11535_length_287_cov_1.457944_g11412_i0 PRJNA1227535 11535 287 1.457944 4.18429928 Bacteria 2 Bacteria Bacteria 103 1.88e-24   NR HEY9840260.1 2364082 g11412 i0 62.4 1.77700348432056 85 32 88.9 0 31 285 9 93 HEY9840260.1 diguanylate cyclase [Candidatus Obscuribacterales bacterium] diamond 510 103 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31621297 31621297 PRJNA1227535_P_NODE_22256_length_253_cov_0.866667_g22132_i0 PRJNA1227535 22256 253 0.866667 2.19266751 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 162 7.8199999999999985e-47   NR MBX9770977.1 2364082 g22132 i0 96.4 0.99604743083004 84 3 99.6 0 2 253 43 126 MBX9770977.1 phosphoglycerate kinase [Candidatus Obscuribacterales bacterium] diamond 252 162 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;