RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1227535" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1227535 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2886195 2886195 PRJNA1227535_P_NODE_21603_length_253_cov_2.550000_g21479_i0 PRJNA1227535 21603 253 2.55 6.4515 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 164 5.329999999999998e-47   NR MBY0273696.1 2838779 g21479 i0 94 0.99604743083004 84 5 99.6 0 252 1 175 258 MBY0273696.1 LL-diaminopimelate aminotransferase [Candidatus Binatia bacterium] diamond 252 164 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
7988949 7988949 PRJNA1227535_P_NODE_6947_length_312_cov_2.983264_g6824_i0 PRJNA1227535 6947 312 2.983264 9.30778368 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 102 5.74e-23   NR MFN8601089.1 2838779 g6824 i0 100 0.471153846153846 49 0 47.1 0 164 310 84 132 MFN8601089.1 TolC family protein [Candidatus Binatia bacterium] diamond 147 102 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;