RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1227535" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1227535 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11814006 11814006 PRJNA1227535_P_NODE_27930_length_245_cov_1.813953_g27806_i0 PRJNA1227535 27930 245 1.813953 4.44418485 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 372 1.49e-98   NTclustered gi|820695469|tpe|LN714488.1| 572307 g27806 i0 93.927 39.4040816326531 247 13 100 1 1 245 116085 116331 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 9654 372 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
22012055 22012055 PRJNA1227535_P_NODE_25098_length_249_cov_0.886364_g24974_i0 PRJNA1227535 25098 249 0.886364 2.20704636 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 351 1.98e-92   NTclustered gi|820695469|tpe|LN714488.1| 572307 g24974 i0 92.683 36.9076305220884 246 15 100 3 1 245 96675 96432 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 9190 351 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;