contig_metadata
9 rows where bioproject = "PRJNA1227535", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7988731 | 7988731 | PRJNA1227535_P_NODE_22427_length_252_cov_1.865922_g22303_i0 | PRJNA1227535 | 22427 | 252 | 1.865922 | 4.70212344 | Geotalea uraniireducens | 351604 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|146395585|gb|CP000698.1| | 351605 | g22303 | i0 | 100 | 0.111111111111111 | 28 | 0 | 11 | 0 | 191 | 218 | 4716707 | 4716680 | Geobacter uraniireducens Rf4, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geotalea | Geotalea uraniireducens | ||
| 10539386 | 10539386 | PRJNA1227535_P_NODE_6349_length_312_cov_3.439331_g6226_i0 | PRJNA1227535 | 6349 | 312 | 3.439331 | 10.73071272 | Smithellaceae bacterium | 2964540 | Bacteria | Bacteria | 65.8 | 3.75e-6 | NTclustered | gi|2626216295|emb|OY821638.1| | 2964540 | g6226 | i0 | 95.122 | 173.185897435897 | 41 | 2 | 15 | 0 | 166 | 206 | 3768728 | 3768768 | MAG: Smithellaceae bacterium isolate 7d888188-1d27-4603-a379-950c855845c6 genome assembly, chromosome: 1 | blastn | 54034 | 65.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithellaceae bacterium | |||
| 13089059 | 13089059 | PRJNA1227535_P_NODE_27071_length_246_cov_1.803468_g26947_i0 | PRJNA1227535 | 27071 | 246 | 1.803468 | 4.43653128 | Syntrophus buswellii | 43774 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2869717242|gb|CP175563.1| | 43774 | g26947 | i0 | 100 | 0.117886178861789 | 29 | 0 | 12 | 0 | 18 | 46 | 1282202 | 1282174 | Syntrophus buswellii strain DM-2 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Syntrophaceae | Syntrophus | Syntrophus buswellii | ||
| 26775203 | 26775203 | PRJNA1227535_P_NODE_31561_length_238_cov_2.587879_g31437_i0 | PRJNA1227535 | 31561 | 238 | 2.587879 | 6.15915202 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 71.6 | 1.47e-12 | NR | WP_093395495.1 | 39841 | g31437 | i0 | 61.5 | 1.42436974789916 | 52 | 20 | 65.5 | 0 | 81 | 236 | 4 | 55 | WP_093395495.1 metallophosphoesterase [Thermodesulforhabdus norvegica] | diamond | 339 | 71.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Thermodesulforhabdaceae | Thermodesulforhabdus | Thermodesulforhabdus norvegica | ||
| 26788061 | 26788061 | PRJNA1227535_P_NODE_9581_length_294_cov_2.357466_g9458_i0 | PRJNA1227535 | 9581 | 294 | 2.357466 | 6.93095004 | Thermodesulfobacteriales bacterium | 2528040 | Bacteria | Bacteria | 131 | 1.15e-34 | NR | TFG74495.1 | 2528040 | g9458 | i0 | 71.9 | 0.979591836734694 | 96 | 26 | 98 | 1 | 292 | 5 | 237 | 331 | TFG74495.1 MAG: hypothetical protein E4H21_10755 [Thermodesulfobacteriales bacterium] | diamond | 288 | 131 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteria | Thermodesulfobacteriales | Thermodesulfobacteriales bacterium | ||||
| 28449691 | 28449691 | PRJNA1227535_P_NODE_15466_length_273_cov_2.505000_g15343_i0 | PRJNA1227535 | 15466 | 273 | 2.505 | 6.83865 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 99.4 | 6.75e-22 | NR | MDR3361910.1 | 885 | g15343 | i0 | 59.7 | 2.74725274725275 | 72 | 29 | 79.1 | 0 | 218 | 3 | 639 | 710 | MDR3361910.1 BREX-1 system adenine-specific DNA-methyltransferase PglX [Desulfovibrio sp.] | diamond | 750 | 100 | 0.994 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. | ||
| 29093986 | 29093986 | PRJNA1227535_P_NODE_29368_length_244_cov_0.871345_g29244_i0 | PRJNA1227535 | 29368 | 244 | 0.871345 | 2.1260818 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 96.3 | 5.0499999999999987e-23 | NR | MBS3732482.1 | 2044940 | g29244 | i0 | 88.9 | 0.663934426229508 | 54 | 6 | 66.4 | 0 | 242 | 81 | 114 | 167 | MBS3732482.1 hypothetical protein [Desulfobacterales bacterium] | diamond | 162 | 96.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 31747803 | 31747803 | PRJNA1227535_P_NODE_13637_length_280_cov_1.265700_g13514_i0 | PRJNA1227535 | 13637 | 280 | 1.2657 | 3.5439600000000002 | Desulfuromonadales bacterium | 2099678 | Bacteria | Bacteria | 105 | 5.3699999999999995e-25 | NR | MCK4620707.1 | 2099678 | g13514 | i0 | 60 | 0.964285714285714 | 90 | 34 | 96.4 | 1 | 278 | 9 | 156 | 243 | MCK4620707.1 ParB/RepB/Spo0J family partition protein [Desulfuromonadales bacterium] | diamond | 270 | 105 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadales bacterium | ||||
| 32853789 | 32853789 | PRJNA1227535_P_NODE_13180_length_281_cov_2.052885_g13057_i0 | PRJNA1227535 | 13180 | 281 | 2.052885 | 5.76860685 | Desulfurivibrionaceae bacterium | 3024425 | Bacteria | Bacteria | 94.7 | 3.21e-20 | NR | MFO7607497.1 | 3024425 | g13057 | i0 | 46.7 | 0.98220640569395 | 92 | 49 | 98.2 | 0 | 2 | 277 | 1405 | 1496 | MFO7607497.1 dockerin type I domain-containing protein [Desulfurivibrionaceae bacterium] | diamond | 276 | 94.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfurivibrionaceae | Desulfurivibrionaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;