RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1227535", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1227535 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9263382 9263382 PRJNA1227535_P_NODE_24268_length_250_cov_0.881356_g24144_i0 PRJNA1227535 24268 250 0.881356 2.20339 Brachionus plicatilis 10195 Rotifera other_Eukaryota 114 2.81e-30   NR RNA41367.1 10195 g24144 i0 74 0.924 77 20 92.4 0 16 246 71 147 RNA41367.1 eukaryotic translation initiation factor 5A [Brachionus plicatilis] diamond 231 114 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
27862336 27862336 PRJNA1227535_P_NODE_23085_length_251_cov_2.505618_g22961_i0 PRJNA1227535 23085 251 2.505618 6.28910118 Adineta ricciae 249248 Rotifera other_Eukaryota 51.2 3.85e-5   NR CAF1676020.1 249248 g22961 i0 56.1 0.49003984063745 41 18 49 0 157 35 39 79 CAF1676020.1 unnamed protein product [Adineta ricciae] diamond 123 51.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;