RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1227535", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1227535 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5438651 5438651 PRJNA1227535_P_NODE_29145_length_244_cov_0.912281_g29021_i0 PRJNA1227535 29145 244 0.912281 2.22596564 Haliotis rubra 36100 Mollusca Mollusca 89.8 1.68e-13   NTclustered gi|2194096104|ref|XM_046704254.1| 36100 g29021 i0 96.296 0.442622950819672 54 2 22 0 23 76 1301 1248 PREDICTED: Haliotis rubra uncharacterized LOC124269236 (LOC124269236), transcript variant X1, mRNA blastn 108 89.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra
7988707 7988707 PRJNA1227535_P_NODE_21107_length_255_cov_1.714286_g20983_i0 PRJNA1227535 21107 255 1.714286 4.3714293 Pecten maximus 6579 Mollusca Mollusca 52.8 0.023   NTclustered gi|1835463220|ref|XM_033887903.1| 6579 g20983 i0 100 0.109803921568627 28 0 11 0 58 85 1198 1171 PREDICTED: Pecten maximus uncharacterized LOC117329773 (LOC117329773), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
11813953 11813953 PRJNA1227535_P_NODE_24710_length_249_cov_1.772727_g24586_i0 PRJNA1227535 24710 249 1.772727 4.41409023 Pomacea canaliculata 400727 Mollusca Mollusca 52.8 0.023   NTclustered gi|1397709880|ref|XM_025246319.1| 400727 g24586 i0 96.875 0.257028112449799 32 0 13 1 74 105 705 675 PREDICTED: Pomacea canaliculata uncharacterized LOC112568822 (LOC112568822), mRNA blastn 64 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
15074549 15074549 PRJNA1227535_P_NODE_2112_length_462_cov_1.393316_g1990_i0 PRJNA1227535 2112 462 1.393316 6.43711992 Metazoa 33208 Mollusca Mollusca 854 0   NTclustered gi|1928112764|gb|MT947788.1| 6523 g1990 i0 100 100 462 0 100 0 1 462 1558 1097 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 46200 854 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
22011937 22011937 PRJNA1227535_P_NODE_18198_length_264_cov_2.324607_g18074_i0 PRJNA1227535 18198 264 2.324607 6.13696248 Mytilus californianus 6549 Mollusca Mollusca 156 1.7900000000000002e-33   NTclustered gi|2334719718|ref|XM_052247310.1| 6549 g18074 i0 87.77 4.06060606060606 139 10 52 4 127 263 6483 6350 PREDICTED: Mytilus californianus uncharacterized LOC127736727 (LOC127736727), mRNA blastn 1072 156 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
27198942 27198942 PRJNA1227535_P_NODE_13622_length_280_cov_1.328502_g13499_i0 PRJNA1227535 13622 280 1.328502 3.7198056 Mytilus galloprovincialis 29158 Mollusca Mollusca 49.7 1.94e-4   NR VDI62983.1 29158 g13499 i0 47.2 2.28214285714286 36 19 38.6 0 139 32 61 96 VDI62983.1 Hypothetical predicted protein [Mytilus galloprovincialis] diamond 639 49.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus galloprovincialis
28557209 28557209 PRJNA1227535_P_NODE_24967_length_249_cov_0.886364_g24843_i0 PRJNA1227535 24967 249 0.886364 2.20704636 Bulinus truncatus 55810 Mollusca Mollusca 43.1 0.0288   NR KAH9512732.1 55810 g24843 i0 45.2 0.506024096385542 42 23 50.6 0 14 139 248 289 KAH9512732.1 hypothetical protein Btru_038047 [Bulinus truncatus] diamond 126 43.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Bulinus Bulinus truncatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;