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contig_metadata

13 rows where bioproject = "PRJNA1227535" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 13 ✖

bioproject 1

  • PRJNA1227535 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8700088 8700088 PRJNA1227535_P_NODE_5327_length_322_cov_1.184739_g5204_i0 PRJNA1227535 5327 322 1.184739 3.81485958 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 259 1.66e-64   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5204 i0 96.226 2.1055900621118 159 4 49 1 1 157 2924 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 678 259 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
9263445 9263445 PRJNA1227535_P_NODE_28068_length_245_cov_1.430233_g27944_i0 PRJNA1227535 28068 245 1.430233 3.50407085 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 134 1.78e-36   NR EJK48596.1 159749 g27944 i0 81.3 25.5061224489796 80 15 98 0 244 5 53 132 EJK48596.1 hypothetical protein THAOC_32592 [Thalassiosira oceanica] diamond 6249 134 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira oceanica
11814006 11814006 PRJNA1227535_P_NODE_27930_length_245_cov_1.813953_g27806_i0 PRJNA1227535 27930 245 1.813953 4.44418485 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 372 1.49e-98   NTclustered gi|820695469|tpe|LN714488.1| 572307 g27806 i0 93.927 39.4040816326531 247 13 100 1 1 245 116085 116331 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 9654 372 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
20173283 20173283 PRJNA1227535_P_NODE_2496_length_432_cov_2.835655_g2374_i0 PRJNA1227535 2496 432 2.835655 12.2500296 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 702 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2374 i0 96.056 71.4722222222222 431 17 99 0 1 431 55 485 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 30876 702 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
22012055 22012055 PRJNA1227535_P_NODE_25098_length_249_cov_0.886364_g24974_i0 PRJNA1227535 25098 249 0.886364 2.20704636 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 351 1.98e-92   NTclustered gi|820695469|tpe|LN714488.1| 572307 g24974 i0 92.683 36.9076305220884 246 15 100 3 1 245 96675 96432 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 9190 351 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
23287785 23287785 PRJNA1227535_P_NODE_6359_length_312_cov_3.430962_g6236_i0 PRJNA1227535 6359 312 3.430962 10.70460144 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.029   NTclustered gi|145479822|ref|XM_001425897.1| 5888 g6236 i0 100 0.0897435897435897 28 0 9 0 278 305 473 446 Paramecium tetraurelia uncharacterized protein (GSPATT00004909001), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
28620394 28620394 PRJNA1227535_P_NODE_10607_length_290_cov_1.976959_g10484_i0 PRJNA1227535 10607 290 1.976959 5.7331811 Peronospora farinosa 134698 SAR_Eukaryotes SAR_Eukaryotes 102 3.88e-23   NR CAI5722522.1 134698 g10484 i0 87.5 1.15862068965517 56 7 57.9 0 288 121 319 374 CAI5722522.1 unnamed protein product [Peronospora farinosa] diamond 336 102 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora farinosa
29188752 29188752 PRJNA1227535_P_NODE_19329_length_261_cov_1.303191_g19205_i0 PRJNA1227535 19329 261 1.303191 3.40132851 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 152 1.93e-41   NR KAJ1439139.1 483371 g19205 i0 82.8 2 87 15 100 0 261 1 327 413 KAJ1439139.1 chaperonin Cpn60/TCP-1 family [Ochromonadaceae sp. CCMP2298] diamond 522 152 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
29567312 29567312 PRJNA1227535_P_NODE_25010_length_249_cov_0.886364_g24886_i0 PRJNA1227535 25010 249 0.886364 2.20704636 Synura synuroidea 47573 SAR_Eukaryotes SAR_Eukaryotes 50.4 7.57e-5   NR NP_038170.1 47573 g24886 i0 36.8 0.91566265060241 76 46 90.4 2 226 2 371 445 NP_038170.1 NADH dehydrogenase subunit 11 [Synura synuroidea] diamond 228 50.4 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura synuroidea
30281510 30281510 PRJNA1227535_P_NODE_26052_length_247_cov_4.028736_g25928_i0 PRJNA1227535 26052 247 4.028736 9.95097792 root 1 Root_unresolved Root_unresolved 46.6 0.00179   NR CAB9507385.1 568900 g25928 i0 35.8 2.79352226720648 81 51 97.2 1 241 2 2213 2293 CAB9507385.1 Clustered mitochondria protein homolog [Seminavis robusta] diamond 690 46.6 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta
31007804 31007804 PRJNA1227535_P_NODE_17414_length_267_cov_1.525773_g17291_i0 PRJNA1227535 17414 267 1.525773 4.07381391 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 100 1.84e-22   NR OQR90711.1 74557 g17291 i0 56.6 4.64044943820225 76 33 85.4 0 264 37 158 233 OQR90711.1 coatomer subunit gamma [Thraustotheca clavata] diamond 1239 100 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
31779381 31779381 PRJNA1227535_P_NODE_26717_length_247_cov_0.896552_g26593_i0 PRJNA1227535 26717 247 0.896552 2.21448344 Mayamaea pseudoterrestris 2872254 SAR_Eukaryotes SAR_Eukaryotes 100 1.78e-22   NR GKY97920.1 2872254 g26593 i0 59 1.0080971659919 83 31 97.2 1 245 6 206 288 GKY97920.1 hypothetical protein MPSEU_000750000 [Mayamaea pseudoterrestris] diamond 249 100 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Mayamaea Mayamaea pseudoterrestris
31779385 31779385 PRJNA1227535_P_NODE_9617_length_294_cov_2.018100_g9494_i0 PRJNA1227535 9617 294 2.0181 5.933214 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 173 6.42e-49   NR KAJ1416357.1 483371 g9494 i0 90.7 0.989795918367347 97 9 99 0 292 2 263 359 KAJ1416357.1 chaperonin Cpn60/TCP-1 family [Ochromonadaceae sp. CCMP2298] diamond 291 173 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;